RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RNF44Q7L0R7 432 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 CCDC117Q8IWD4 279 aaPredicted RBP6.51□□□□□ -1.37
MRE11-209ENST00000540013 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 SAMD14Q8IZD0 417 aaPredicted RBP6.51□□□□□ -1.37
MRE11-209ENST00000540013 NUP93Q8N1F7 819 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 SH2D3CQ8N5H7 860 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 LILRB1Q8NHL6 650 aaPredicted RBP6.51□□□□□ -1.37
MRE11-209ENST00000540013 TBC1D22AQ8WUA7 517 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 ZNF480Q8WV37 535 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 RNF125Q96EQ8 232 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 PRPF18Q99633 342 aaKnown RBP6.51□□□□□ -1.37
MRE11-209ENST00000540013 C7orf25Q9BPX7 421 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 TRIM54Q9BYV2 358 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 MAGEB5Q9BZ81 275 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 PABPC3Q9H361 631 aaKnown RBP6.51□□□□□ -1.37
MRE11-209ENST00000540013 PRDM8Q9NQV8 689 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 PLA2G3Q9NZ20 509 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 NCDNQ9UBB6 729 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 BLOC1S6Q9UL45 172 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 ATP6V0A2Q9Y487 856 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 INSRP06213 1382 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 CASZ1Q86V15 1759 aa6.51□□□□□ -1.37
MRE11-209ENST00000540013 AGAP14A8MT82 685 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 H0Y3Z8 333 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 CYP27B1O15528 508 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 TSPAN3O60637 253 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ACTL6BO94805 426 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 PRKCBP05771 671 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 QDPRP09417 244 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 SRGAP2BP0DMP2 458 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 LAMP2P13473 410 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 RXRAP19793 462 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ABCD3P28288 659 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 GABRB3P28472 473 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ARL3P36405 182 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 SELENOPP49908 381 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 NLRP5P59047 1200 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ADAM8P78325 824 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 BFSP1Q12934 665 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 BAK1Q16611 211 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 TXNRD1Q16881 649 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 TMEM266Q2M3C6 531 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 SETMARQ53H47 684 aaPredicted RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 ARHGAP15Q53QZ3 475 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 METTL24Q5JXM2 366 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ATG16L1Q676U5 607 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 FAM111BQ6SJ93 734 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 UNC45BQ8IWX7 931 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 FUKQ8N0W3 1084 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ADSSL1Q8N142 457 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ANKRD35Q8N283 1001 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 GPR156Q8NFN8 814 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 OR2I1PQ8NGU4 316 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 BRIX1Q8TDN6 353 aaKnown RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 FAM120BQ96EK7 910 aaKnown RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 CALML4Q96GE6 196 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 DMRTA2Q96SC8 542 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ITPAQ9BY32 194 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 DPH1Q9BZG8 443 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ACAD9Q9H845 621 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 ERVK-5Q9HDB9 667 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 RBM12Q9NTZ6 932 aaKnown RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 TRMT1Q9NXH9 659 aaKnown RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 ING3Q9NXR8 418 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 MTF2Q9Y483 593 aaPredicted RBP6.5□□□□□ -1.37
MRE11-209ENST00000540013 ITGB4P16144 1822 aa6.5□□□□□ -1.37
MRE11-209ENST00000540013 UBE2QL1A1L167 161 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 B8ZZF3 427 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 FOXS1O43638 330 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 BEST1O76090 585 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 SLC4A1P02730 911 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CNPP09543 421 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 HSPA1AP0DMV8 641 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 HSPA1BP0DMV9 641 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 HDCP19113 662 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PSMA4P25789 261 aaKnown RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 ECHS1P30084 290 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 ACSL1P33121 698 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CRHR1P34998 444 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 MAGEA10P43363 369 aaPredicted RBP6.49□□□□□ -1.37
MRE11-209ENST00000540013 ALDH3A2P51648 485 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 EVCP57679 992 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 AP2B1P63010 937 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 RBP5P82980 135 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 CDC42EP1Q00587 391 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 PPP3CAQ08209 521 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 AP1B1Q10567 949 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TFCP2Q12800 502 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 EFEMP1Q12805 493 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 LRMPQ12912 555 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 EPS8Q12929 822 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 TRIM29Q14134 588 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 C11orf88Q6PI97 169 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 SZRD1Q7Z422 152 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 ANKS1BQ7Z6G8 1248 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 SLFN11Q7Z7L1 901 aa6.49□□□□□ -1.37
MRE11-209ENST00000540013 NLRP14Q86W24 1093 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms