RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 FLOT2Q14254 428 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 DUPD1Q68J44 220 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ZCCHC23Q6ZST2 131 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ACOT1Q86TX2 421 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 NT5DC4Q86YG4 428 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ATXN2LQ8WWM7 1075 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 KAT2BQ92831 832 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 NMD3Q96D46 503 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CEP41Q9BYV8 373 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 DNAJC16Q9Y2G8 782 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 V9GYQ6 96 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PPP1R12AO14974 1030 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 MICAL2O94851 1124 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PGK1P00558 417 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF865P0CJ78 1059 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CHKAP35790 457 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SULT1E1P49888 294 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 TPI1P60174 286 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PREPLQ4J6C6 727 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SLC12A6Q9UHW9 1150 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 E9PBE3 544 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 FCHO1O14526 889 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 KLHL41O60662 606 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 POLBP06746 335 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 CALB2P22676 271 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SPRP35270 261 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 DSG1Q02413 1049 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 LINC01465Q8N7H1 131 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 CD101Q93033 1021 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 C18orf25Q96B23 403 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 ELOVL4Q9GZR5 314 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SDCBP2Q9H190 292 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 RHBDL2Q9NX52 303 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 UBQLN1Q9UMX0 589 aaKnown RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SYCE1LA8MT33 242 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 DNALI1O14645 258 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 CACNA2D1P54289 1103 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SNX17Q15036 470 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PDCD2Q16342 344 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 C17orf99Q6UX52 265 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 ANGPTL8Q6UXH0 198 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 TWNKQ96RR1 684 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SPON2Q9BUD6 331 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 MRPL1Q9BYD6 325 aaKnown RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 UNKQ9C0B0 810 aaKnown RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 DNM1LO00429 736 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 CILPO75339 1184 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 KRT16P08779 473 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 GFAPP14136 432 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 VCPP55072 806 aaKnown RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PCSK7Q16549 785 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PTPN20Q4JDL3 420 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SLC26A11Q86WA9 606 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 SLC4A11Q8NBS3 891 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 CKAP2Q8WWK9 683 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 DACT3Q96B18 629 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-202ENST00000540010 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 HAUS8Q9BT25 410 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 OSBPL7Q9BZF2 842 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PLEKHA5Q9HAU0 1116 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
TRAF1-202ENST00000540010 TMEM191CA6NGB0 347 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 C3orf70A6NLC5 250 aaPredicted RBP10.27□□□□□ -0.76
TRAF1-202ENST00000540010 BANF1O75531 89 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 MT-CO1P00395 513 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 CD4P01730 458 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 ACCSLQ4AC99 568 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 BOLA3Q53S33 107 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 ITPRIPL1Q6GPH6 555 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 DENND5BQ6ZUT9 1274 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 ABI1Q8IZP0 508 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 STK32AQ8WU08 396 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF560Q96MR9 790 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 CCT7Q99832 543 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 TBC1D10AQ9BXI6 508 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 SLC24A2Q9UI40 661 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 TSPAN16Q9UKR8 245 aa10.27□□□□□ -0.76
TRAF1-202ENST00000540010 KBTBD13C9JR72 458 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 MYCP01106 439 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-202ENST00000540010 AXLP30530 894 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 EIF1ADQ8N9N8 165 aaKnown RBP10.27□□□□□ -0.77
TRAF1-202ENST00000540010 MTG1Q9BT17 334 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-202ENST00000540010 BCO2Q9BYV7 579 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 ADNPQ9H2P0 1102 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 KCNA4P22459 653 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 KPNB1Q14974 876 aaKnown RBP10.27□□□□□ -0.77
TRAF1-202ENST00000540010 TTC27Q6P3X3 843 aa10.27□□□□□ -0.77
TRAF1-202ENST00000540010 FAM131BQ86XD5 332 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms