RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 V9GYY5 206 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 KCNU1A8MYU2 1149 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF487B1APH4 448 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 H3BRJ5 948 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 CST8O60676 142 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 FGF19O95750 216 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 GOT1P17174 413 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 IL4RP24394 825 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 TFDP2Q14188 446 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 MMGT1Q8N4V1 131 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ATP6V0D2Q8N8Y2 350 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 FAF2Q96CS3 445 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 HAPLN3Q96S86 360 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 KRT12Q99456 494 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 PRKD2Q9BZL6 878 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 OSBPL2Q9H1P3 480 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 IGFLR1Q9H665 355 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 RCOR3Q9P2K3 495 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 DNMT3BQ9UBC3 853 aaKnown RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 SLC12A6Q9UHW9 1150 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 SNX10Q9Y5X0 201 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 CCDC195A0A1B0GUA6 201 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 A0A1W2PRU2 124 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
TRAF3-204ENST00000539721 PHF2O75151 1096 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 PAGE1O75459 146 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 IGLV3-27P01718 113 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
TRAF3-204ENST00000539721 RING1Q06587 406 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 PDZD4Q76G19 769 aaPredicted RBP16.73■□□□□ 0.27
TRAF3-204ENST00000539721 PRELID2Q8N945 189 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 CSPG4P5Q96PW8 444 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 EPAS1Q99814 870 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 RNF38Q9H0F5 515 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 SIK2Q9H0K1 926 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
TRAF3-204ENST00000539721 OR12D3Q9UGF7 316 aa16.73■□□□□ 0.27
TRAF3-204ENST00000539721 FAM72CH0Y354 149 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 POU2F2P09086 479 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 GJA1P17302 382 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 GGCXP38435 758 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 EPHA5P54756 1037 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 TUBB4BP68371 445 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 COG7P83436 770 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 SEMA3BQ13214 749 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 FAM72AQ5TYM5 149 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 NUGGCQ68CJ6 796 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 FAM72DQ6L9T8 149 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 FAM72BQ86X60 149 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 LEMD2Q8NC56 503 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 PCDH19Q8TAB3 1148 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 C1orf54Q8WWF1 131 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 UBXN4Q92575 508 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 MAGOHBQ96A72 148 aaKnown RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 HAUS1Q96CS2 278 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 NSUN3Q9H649 340 aaKnown RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 R3HDM2Q9Y2K5 976 aaKnown RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 A0A1W2PPC1 479 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 APOL1O14791 398 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 DAPK3O43293 454 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 RHOP08100 348 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 KCNQ1P51787 676 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF135P52742 658 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 TPI1P60174 286 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 CYP1B1Q16678 543 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 RFX8Q6ZV50 586 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 UNC45BQ8IWX7 931 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 PQLC3Q8N755 202 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 ARL14EPQ8N8R7 260 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 MAB21L3Q8N8X9 362 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 C12orf50Q8NA57 414 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 VN1R2Q8NFZ6 395 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 PLD4Q96BZ4 506 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 BTN2A3PQ96KV6 586 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 DCLK3Q9C098 648 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 SFXN1Q9H9B4 322 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 PIDD1Q9HB75 910 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 HOMER3Q9NSC5 361 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
TRAF3-204ENST00000539721 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
TRAF3-204ENST00000539721 TRANK1O15050 2925 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 MYO9BQ13459 2157 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 HDCP19113 662 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 AMPD1P23109 780 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 CHRNA3P32297 505 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 CCR2P41597 374 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 KCNC3Q14003 757 aa16.71■□□□□ 0.27
TRAF3-204ENST00000539721 SLC9A4Q6AI14 798 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms