RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 C4orf47A7E2U8 309 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 SART1O43290 800 aaKnown RBP23.14■■□□□ 1.29
SCARB1-206ENST00000539320 IGLV3-27P01718 113 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 ENPP2Q13822 863 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 MEA1Q16626 185 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 TRIM61Q5EBN2 209 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 ADGRF1Q5T601 910 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 NUGGCQ68CJ6 796 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 ENOSF1Q7L5Y1 443 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 LSM14BQ9BX40 385 aaKnown RBP23.14■■□□□ 1.29
SCARB1-206ENST00000539320 CIPCQ9C0C6 399 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 MIS12Q9H081 205 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 SLC6A17Q9H1V8 727 aa23.14■■□□□ 1.29
SCARB1-206ENST00000539320 UBE2TQ9NPD8 197 aaPredicted RBP23.14■■□□□ 1.29
SCARB1-206ENST00000539320 CKAP5Q14008 2032 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 ITPKAP23677 461 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 HOXD12P35452 270 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 ZNF234Q14588 700 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 FUT11Q495W5 492 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 DAB2IPQ5VWQ8 1189 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 PEAR1Q5VY43 1037 aaPredicted RBP23.13■■□□□ 1.29
SCARB1-206ENST00000539320 WFIKKN2Q8TEU8 576 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 CRACR2AQ9BSW2 395 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 NUSAP1Q9BXS6 441 aaKnown RBP23.13■■□□□ 1.29
SCARB1-206ENST00000539320 CD93Q9NPY3 652 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 ST7Q9NRC1 585 aa23.13■■□□□ 1.29
SCARB1-206ENST00000539320 MED7O43513 233 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 GPD2P43304 727 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 ACADSBP45954 432 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 RPL34P49207 117 aaKnown RBP23.12■■□□□ 1.29
SCARB1-206ENST00000539320 TBX4P57082 545 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 IRX4P78413 519 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 RING1Q06587 406 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 DENND1BQ6P3S1 775 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 TRIM65Q6PJ69 517 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 CREBRFQ8IUR6 639 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 UNC45BQ8IWX7 931 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 FAM149B1Q96BN6 582 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 TMA16Q96EY4 203 aaKnown RBP23.12■■□□□ 1.29
SCARB1-206ENST00000539320 FAM81BQ96LP2 452 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 MED15Q96RN5 788 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 TMEM74BQ9NUR3 256 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 PILRBQ9UKJ0 227 aa23.12■■□□□ 1.29
SCARB1-206ENST00000539320 ASCC3Q8N3C0 2202 aaKnown RBP23.11■■□□□ 1.29
SCARB1-206ENST00000539320 THAP12O43422 761 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 LETM1O95202 739 aaPredicted RBP23.11■■□□□ 1.29
SCARB1-206ENST00000539320 HLA-FP30511 346 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 GNA15P30679 374 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 SLC11A2P49281 568 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 ARID5AQ03989 594 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 ZNF33AQ06730 810 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 LMAN2Q12907 356 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 TMEM215Q68D42 235 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 GJB7Q6PEY0 223 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 DEFB119Q8N690 84 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.11■■□□□ 1.29
SCARB1-206ENST00000539320 DQX1Q8TE96 717 aaKnown RBP23.11■■□□□ 1.29
SCARB1-206ENST00000539320 SORCS1Q8WY21 1168 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 SERPINB11Q96P15 392 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 CEP192Q8TEP8 1941 aa23.11■■□□□ 1.29
SCARB1-206ENST00000539320 TIMM44O43615 452 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 SYNCRIPO60506 623 aaKnown RBP23.1■■□□□ 1.29
SCARB1-206ENST00000539320 NCAM1P13591 858 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 PRKCHP24723 683 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 NNTQ13423 1086 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 FAM133BQ5BKY9 247 aaKnown RBP23.1■■□□□ 1.29
SCARB1-206ENST00000539320 SERPINA13PQ6UXR4 307 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 GBP6Q6ZN66 633 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 MLKLQ8NB16 471 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 STK32AQ8WU08 396 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 HSPA12BQ96MM6 686 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 IRX2Q9BZI1 471 aaPredicted RBP23.1■■□□□ 1.29
SCARB1-206ENST00000539320 MKRN2Q9H000 416 aaKnown RBP23.1■■□□□ 1.29
SCARB1-206ENST00000539320 CLSTN2Q9H4D0 955 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 PRDM16Q9HAZ2 1276 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 APEX2Q9UBZ4 518 aa23.1■■□□□ 1.29
SCARB1-206ENST00000539320 GTPBP10A4D1E9 387 aaKnown RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 CDX4O14627 284 aaPredicted RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 ACSL4O60488 711 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 NDUFS2O75306 463 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 KCNK5O95279 499 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 CFIP05156 583 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 FYNP06241 537 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 MTIF2P46199 727 aaKnown RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 SGSHP51688 502 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 EXOC3L4Q17RC7 722 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 RFWD3Q6PCD5 774 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 SLC23A3Q6PIS1 610 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 CHST9Q7L1S5 443 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 RABEPKQ7Z6M1 372 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 METTL3Q86U44 580 aaKnown RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 SLC41A1Q8IVJ1 513 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 AHI1Q8N157 1196 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 CEP76Q8TAP6 659 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 FCRL2Q96LA5 508 aaPredicted RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 TRIM62Q9BVG3 475 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 SLC4A5Q9BY07 1137 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 ABCB8Q9NUT2 735 aa23.09■■□□□ 1.29
SCARB1-206ENST00000539320 USP36Q9P275 1121 aaKnown RBP23.09■■□□□ 1.29
SCARB1-206ENST00000539320 GGA2Q9UJY4 613 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms