RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TKTL1P51854 596 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 GJA9P57773 515 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 SWT1Q5T5J6 900 aaKnown RBP18.5■□□□□ 0.55
GNE-204ENST00000539208 MTG1Q9BT17 334 aaPredicted RBP18.5■□□□□ 0.55
GNE-204ENST00000539208 MYLK2Q9H1R3 596 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 SMYD2Q9NRG4 433 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 TXLNGQ9NUQ3 528 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 ST3GAL5Q9UNP4 418 aa18.5■□□□□ 0.55
GNE-204ENST00000539208 C2CD2LO14523 706 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 MFSD11O43934 449 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 KRT38O76015 456 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 THP07101 528 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 TROVE2P10155 538 aaKnown RBP eCLIP18.49■□□□□ 0.55
GNE-204ENST00000539208 CCNFP41002 786 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 PITX1P78337 314 aaPredicted RBP18.49■□□□□ 0.55
GNE-204ENST00000539208 DEUP1Q05D60 604 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 DPYSQ14117 519 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 PDK1Q15118 436 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 SYPL2Q5VXT5 272 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 STEAP4Q687X5 459 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 NTAN1Q96AB6 310 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 LGMNQ99538 433 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 RRAGCQ9HB90 399 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 MOCS1Q9NZB8 636 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 KLF11O14901 512 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 RARBP10826 455 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 KCNJ2P63252 427 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 SCAPQ12770 1279 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 LRRC8BQ6P9F7 803 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 C12orf65Q9H3J6 166 aaKnown RBP18.49■□□□□ 0.55
GNE-204ENST00000539208 CNGB3Q9NQW8 809 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 KRT82Q9NSB4 513 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 PIGVQ9NUD9 493 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 RAD54BQ9Y620 910 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 PTCH2Q9Y6C5 1203 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 MAD1L1Q9Y6D9 718 aa18.49■□□□□ 0.55
GNE-204ENST00000539208 WDR91A4D1P6 747 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 MEIS3P2A8K0S8 358 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 COPEO14579 308 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 RFPL1O75677 317 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 TGDSO95455 350 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 ATP6V1G2O95670 118 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 FYNP06241 537 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 MLH1P40692 756 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 HCAR3P49019 387 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 SERPINB9P50453 376 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 DAOAP59103 153 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 DENND5BQ6ZUT9 1274 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 RFX8Q6ZV50 586 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 CCNJLQ8IV13 435 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 MPP5Q8N3R9 675 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 COLGALT1Q8NBJ5 622 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 PGAP3Q96FM1 320 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 P2RY11Q96G91 374 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 FAM111AQ96PZ2 611 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 SRPK1Q96SB4 655 aaKnown RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 GIT1Q9Y2X7 761 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 TRPM7Q96QT4 1865 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 MYADML2A6NDP7 307 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 PPP1R12AO14974 1030 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 IGFBP6P24592 240 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 RPL9P32969 192 aaKnown RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 ADRA1BP35368 520 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 PARP6Q2NL67 630 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 FAM35AQ86V20 835 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 CCDC33Q8N5R6 958 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 PTPRN2Q92932 1015 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 ERP27Q96DN0 273 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 STAMBPL1Q96FJ0 436 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 THOC1Q96FV9 657 aaKnown RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 OXNAD1Q96HP4 312 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 GAD1Q99259 594 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 SMOQ99835 787 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 SENP6Q9GZR1 1112 aaPredicted RBP18.48■□□□□ 0.55
GNE-204ENST00000539208 CDH9Q9ULB4 789 aa18.48■□□□□ 0.55
GNE-204ENST00000539208 SDR42E2A6NKP2 422 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 RNF103O00237 685 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 NRP1O14786 923 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TNPO2O14787 897 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 DCLK1O15075 740 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 AP1G2O75843 785 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 RPLP2P05387 115 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 CSH1P0DML2 217 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 CSH2P0DML3 217 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 CNTFP26441 200 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 GRIA1P42261 906 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TIFABQ6ZNK6 161 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 HFE2Q6ZVN8 426 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 MRPL10Q7Z7H8 261 aaKnown RBP18.47■□□□□ 0.55
GNE-204ENST00000539208 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
GNE-204ENST00000539208 TSSK1BQ9BXA7 367 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms