RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ADRA1DP25100 572 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 GGT5P36269 586 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CARSP49589 748 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CPT1AP50416 773 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 RPS7P62081 194 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 APBA1Q02410 837 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 LAMB3Q13751 1172 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SLC29A2Q14542 456 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 STARD3Q14849 445 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 IQCB1Q15051 598 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FAM187BQ17R55 369 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF789Q5FWF6 425 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PLAC9Q5JTB6 97 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MIIPQ5JXC2 388 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TSHZ3Q63HK5 1081 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TCTN3Q6NUS6 607 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 C16orf89Q6UX73 402 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FAM83HQ6ZRV2 1179 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ARHGEF18Q6ZSZ5 1173 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MICALCLQ6ZW33 695 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MAVSQ7Z434 540 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CLNKQ7Z7G1 428 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 USP37Q86T82 979 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PATL1Q86TB9 770 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CEP57L1Q8IYX8 460 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CFAP52Q8N1V2 620 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TXLNBQ8N3L3 684 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ANKRD52Q8NB46 1076 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TRPV1Q8NER1 839 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 OR5M3Q8NGP4 307 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ADAMTS18Q8TE60 1221 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TRPC4APQ8TEL6 797 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CLEC4CQ8WTT0 213 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 HDAC7Q8WUI4 952 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CCT6BQ92526 530 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 IQCDQ96DY2 449 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF512Q96ME7 567 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CD180Q99467 661 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PLA2G12BQ9BX93 195 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 VPS16Q9H269 839 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MUC13Q9H3R2 512 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ABHD16BQ9H3Z7 469 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CEP72Q9P209 647 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FZD4Q9ULV1 537 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SIRT4Q9Y6E7 314 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 UNC13AQ9UPW8 1703 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PRAMEF33A0A0G2JMD5 474 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 HMX3A6NHT5 357 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZAR1LA6NP61 321 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 C17orf100A8MU93 164 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 J3KTA2 159 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 BCAT2O15382 392 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 AHCYL1O43865 530 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PRAMEF10O60809 474 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CER1O95813 267 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MBPP02686 304 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 GRPP07492 148 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 QDPRP09417 244 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CSF1P09603 554 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 LAMP2P13473 410 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TCEA1P23193 301 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 NFKBIAP25963 317 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 KCNJ4P48050 445 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PER3P56645 1201 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TFAP4Q01664 338 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 G3BP1Q13283 466 aaKnown RBP eCLIP1.18□□□□□ -2.223e-6■■□□□ 12.1
HIF1A-204ENST00000539097 CERCAMQ5T4B2 595 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ARMC3Q5W041 872 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 VWA1Q6PCB0 445 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 LCNL1Q6ZST4 164 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 C11orf44Q8N8P7 122 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ENDOVQ8N8Q3 282 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PSD4Q8NDX1 1056 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 LINS1Q8NG48 757 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 NFKBIDQ8NI38 313 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FEZF2Q8TBJ5 459 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 HIC2Q96JB3 615 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MPP4Q96JB8 637 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FEM1CQ96JP0 617 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PDLIM2Q96JY6 352 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FAR2Q96K12 515 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SLITRK1Q96PX8 696 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MACROD1Q9BQ69 325 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 RTKNQ9BST9 563 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 EDEM3Q9BZQ6 932 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 KLC2Q9H0B6 622 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TASP1Q9H6P5 420 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 BLOC1S4Q9NUP1 217 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 EHD3Q9NZN3 535 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PPP4R1LQ9P1A2 415 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 XPR1Q9UBH6 696 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 DKK3Q9UBP4 350 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 NAALADL1Q9UQQ1 740 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MTO1Q9Y2Z2 717 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 UBE2J1Q9Y385 318 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CCL27Q9Y4X3 112 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PCDHB7Q9Y5E2 793 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 XDHP47989 1333 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SALL3Q9BXA9 1300 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms