RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 OPHN1O60890 802 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 NDUFS2O75306 463 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 CD19P15391 556 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 CD6P30203 668 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 YWHAEP62258 255 aaKnown RBP13.08□□□□□ -0.32
VAMP1-206ENST00000538970 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ZNF234Q14588 700 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 FMNL3Q8IVF7 1028 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 HDDC3Q8N4P3 179 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ENGASEQ8NFI3 743 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 OR2I1PQ8NGU4 316 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 DDI1Q8WTU0 396 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-206ENST00000538970 SLC2A11Q9BYW1 496 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ITM2CQ9NQX7 267 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ELOVL2Q9NXB9 296 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 WSB2Q9NYS7 404 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-206ENST00000538970 HESX1Q9UBX0 185 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 SUSD2Q9UGT4 822 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-206ENST00000538970 SPAARA0A1B0GVQ0 90 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 E7ENQ6 273 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SMC2O95347 1197 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SETSIPP0DME0 302 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 VDRP11473 427 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 PRKCHP24723 683 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 HOXD9P28356 352 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 COPAP53621 1224 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 LRMPQ12912 555 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 E2F5Q15329 346 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 PKDCCQ504Y2 493 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 TMEM215Q68D42 235 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SIX6OS1Q8N1H7 587 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SORCS1Q8WY21 1168 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 KCTD13Q8WZ19 329 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 EDEM1Q92611 657 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 TOE1Q96GM8 510 aaKnown RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 CIPCQ9C0C6 399 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 SFMBT1Q9UHJ3 866 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 STOML2Q9UJZ1 356 aa13.07□□□□□ -0.32
VAMP1-206ENST00000538970 HBS1LQ9Y450 684 aaKnown RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 MUC22E2RYF6 1773 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-206ENST00000538970 MEI4A8MW99 385 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 KCNJ18B7U540 433 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 MSI1O43347 362 aaKnown RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 HYAL3O43820 417 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SYNCRIPO60506 623 aaKnown RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 GJB3O75712 270 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 LATS1O95835 1130 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 EPHX1P07099 455 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SYPP08247 313 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 NCAM1P13591 858 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 CD59P13987 128 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 MAOBP27338 520 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 HLA-FP30511 346 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 FMO5P49326 533 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 TPMTP51580 245 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 DAOAP59103 153 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 ZNF445P59923 1031 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SIM1P81133 766 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 MPPE1Q53F39 396 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 C19orf48Q6RUI8 117 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 TMPRSS6Q8IU80 811 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SCML4Q8N228 414 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 DNASE2BQ8WZ79 361 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 SIPA1Q96FS4 1042 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 GPR174Q9BXC1 333 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 NFE2L3Q9Y4A8 694 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 NEUROG3Q9Y4Z2 214 aa13.06□□□□□ -0.32
VAMP1-206ENST00000538970 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
VAMP1-206ENST00000538970 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
VAMP1-206ENST00000538970 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 PSMA7O14818 248 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 PMM2O15305 246 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 TSPAN3O60637 253 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 PAEPP09466 180 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 LCP1P13796 627 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 GNSP15586 552 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 FAM193AP78312 1265 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms