RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 SPACA6W5XKT8 324 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CRB1P82279 1406 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 KIAA1210Q9ULL0 1709 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CFAP65Q6ZU64 1925 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 PRAMEF22A3QJZ6 481 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 UBXN8O00124 270 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 HS6ST1O60243 411 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 PPP2R1BP30154 601 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 GRB10Q13322 594 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 NDUFAF6Q330K2 333 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZRANB3Q5FWF4 1079 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 DENND5AQ6IQ26 1287 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZNF571Q7Z3V5 609 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ADCY4Q8NFM4 1077 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 NDNQ99608 321 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CINPQ9BW66 212 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZNF446Q9NWS9 450 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 WDR37Q9Y2I8 494 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TULP4Q9NRJ4 1543 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CHADO15335 359 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 BNIP3LO60238 219 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 FLT1P17948 1338 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 PKN1Q16512 942 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 GALNTL6Q49A17 601 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 TCAIMQ8N3R3 496 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 FBXW8Q8N3Y1 598 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 ZNF276Q8N554 614 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 RNF149Q8NC42 400 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 PIK3C3Q8NEB9 887 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 ADAM33Q9BZ11 813 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 FAM49AQ9H0Q0 323 aaPredicted RBP7.09□□□□□ -1.28
SORT1-209ENST00000538502 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.09□□□□□ -1.283e-11■■■□□ 16.8
SORT1-209ENST00000538502 AKAP7Q9P0M2 348 aaPredicted RBP7.09□□□□□ -1.28
SORT1-209ENST00000538502 ZMYM2Q9UBW7 1377 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 RPS6KA6Q9UK32 745 aa7.09□□□□□ -1.28
SORT1-209ENST00000538502 SYNDIG1LA6NDD5 238 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 FARP2O94887 1054 aaPredicted RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 POLR2EP19388 210 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 EZH2Q15910 746 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 KCTD21Q4G0X4 260 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 ATF7IP2Q5U623 682 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 LDHDQ86WU2 507 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 OR56A4Q8NGH8 313 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 RBM46Q8TBY0 533 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 MYLPFQ96A32 169 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 REPS1Q96D71 796 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 CDRT15Q96T59 188 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 MMP19Q99542 508 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 CGRRF1Q99675 332 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 TEX13BQ9BXU2 312 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 GPR63Q9BZJ6 419 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 DPY30Q9C005 99 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 COPS7BQ9H9Q2 264 aaPredicted RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 WDR41Q9HAD4 459 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 KLHL28Q9NXS3 571 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 ZNF624Q9P2J8 865 aaPredicted RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 C3orf18Q9UK00 162 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 FAM196BA6NMK8 535 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 C2CD2LO14523 706 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 FYNP06241 537 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 VAV1P15498 845 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 RPL14P50914 215 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 RPL10AP62906 217 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 FOLH1Q04609 750 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 PUDPQ08623 228 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 ACVR2BQ13705 512 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 MAPK11Q15759 364 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 C5orf22Q49AR2 442 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 DGKKQ5KSL6 1271 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 RBM20Q5T481 1227 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.08□□□□□ -1.28
SORT1-209ENST00000538502 NT5DC3Q86UY8 548 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 APOBEC3FQ8IUX4 373 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 SLC25A41Q8N5S1 370 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 GTF3C2Q8WUA4 911 aaPredicted RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 KATNAL1Q9BW62 490 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 TBC1D10AQ9BXI6 508 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 SHCBP1LQ9BZQ2 653 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 KIAA1683Q9H0B3 1180 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 VANGL2Q9ULK5 521 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 USP18Q9UMW8 372 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 CLCA2Q9UQC9 943 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 TRIM43BA6NCK2 446 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 INPP4BO15327 924 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 KCNH1O95259 989 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 CD151P48509 253 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 OLR1P78380 273 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 STX4Q12846 297 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 LPIN1Q14693 890 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 SLC5A9Q2M3M2 681 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 PGS1Q32NB8 556 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 TYW3Q6IPR3 259 aaKnown RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 KATNAL2Q8IYT4 538 aa7.08□□□□□ -1.28
SORT1-209ENST00000538502 CHORDC1Q9UHD1 332 aaPredicted RBP7.08□□□□□ -1.28
SORT1-209ENST00000538502 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms