RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 COLGALT1Q8NBJ5 622 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 ARMC2Q8NEN0 867 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 ZNF398Q8TD17 642 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 STAMBPL1Q96FJ0 436 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 MED10Q9BTT4 135 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 XAB2Q9HCS7 855 aaKnown RBP25.7■■□□□ 1.71
RAB40C-204ENST00000538492 SEPT10Q9P0V9 454 aa25.7■■□□□ 1.71
RAB40C-204ENST00000538492 A0A0A0MRY4 1105 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 WDR27A2RRH5 827 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 C2orf71A6NGG8 1288 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 MEIS3P2A8K0S8 358 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 NPR3P17342 541 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 PTPN1P18031 435 aaKnown RBP25.7■■□□□ 1.7
RAB40C-204ENST00000538492 NBPF20Q3BBV1 942 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 HFE2Q6ZVN8 426 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 RNF139Q8WU17 664 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 DEPDC1BQ8WUY9 529 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 SPATA13Q96N96 652 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 DNAI2Q9GZS0 605 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 LRRC4Q9HBW1 653 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 PCMTD2Q9NV79 361 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 HEY2Q9UBP5 337 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 PLLPQ9Y342 182 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 PCDHA11Q9Y5I1 949 aa25.7■■□□□ 1.7
RAB40C-204ENST00000538492 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-204ENST00000538492 HMX2A2RU54 273 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 KRT38O76015 456 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 TOMM70O94826 608 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 WARSP23381 471 aaKnown RBP25.69■■□□□ 1.7
RAB40C-204ENST00000538492 CRYBB1P53674 252 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-204ENST00000538492 MAP3K7CLP57077 242 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 MAP2K5Q13163 448 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 MDH1BQ5I0G3 518 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 BSPRYQ5W0U4 402 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 CCNYQ8ND76 341 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 FAM159BA6NKW6 160 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 HAS3O00219 553 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 DAB1O75553 588 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 ARFIP2P53365 341 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 SMAD1Q15797 465 aaKnown RBP25.69■■□□□ 1.7
RAB40C-204ENST00000538492 ACCSLQ4AC99 568 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 MORN1Q5T089 497 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 KIAA0319Q5VV43 1072 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 CLEC20AQ6ZU45 233 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 NME8Q8N427 588 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 TOP6BLQ8N6T0 577 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 OXNAD1Q96HP4 312 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-204ENST00000538492 KCNK13Q9HB14 408 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 SLC17A6Q9P2U8 582 aa25.69■■□□□ 1.7
RAB40C-204ENST00000538492 RNF103O00237 685 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 RARBP10826 455 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 TP53INP2Q8IXH6 220 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 SIX6OS1Q8N1H7 587 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 ADAM32Q8TC27 787 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 P2RY11Q96G91 374 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 TMEM120AQ9BXJ8 343 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 FBXO6Q9NRD1 293 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-204ENST00000538492 C17orf102A2RUQ5 167 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 TOP3BO95985 862 aaKnown RBP25.68■■□□□ 1.7
RAB40C-204ENST00000538492 GSTA2P09210 222 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 CPT1AP50416 773 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 SESN2P58004 480 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-204ENST00000538492 TBC1D10AQ9BXI6 508 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 PIGVQ9NUD9 493 aa25.68■■□□□ 1.7
RAB40C-204ENST00000538492 CCDC195A0A1B0GUA6 201 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 NOS2P35228 1153 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 TKTL1P51854 596 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 CTC1Q2NKJ3 1217 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 CCDC91Q7Z6B0 441 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 NDUFAF2Q8N183 169 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 INPP5DQ92835 1189 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 CELF2O95319 508 aaKnown RBP25.67■■□□□ 1.7
RAB40C-204ENST00000538492 DLDP09622 509 aaKnown RBP25.67■■□□□ 1.7
RAB40C-204ENST00000538492 EPHB2P29323 1055 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 SERPINB3P29508 390 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 SARNPP82979 210 aaKnown RBP25.67■■□□□ 1.7
RAB40C-204ENST00000538492 RNF169Q8NCN4 708 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 PRR11Q96HE9 360 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-204ENST00000538492 NPY6RQ99463 290 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 KRT82Q9NSB4 513 aa25.67■■□□□ 1.7
RAB40C-204ENST00000538492 TIMM13Q9Y5L4 95 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-204ENST00000538492 HACD1B0YJ81 288 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 CYP2B6P20813 491 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 AFF1P51825 1210 aaKnown RBP25.66■■□□□ 1.7
RAB40C-204ENST00000538492 DEUP1Q05D60 604 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 PARP6Q2NL67 630 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 BZW1Q7L1Q6 419 aaKnown RBP25.66■■□□□ 1.7
RAB40C-204ENST00000538492 H3BRJ5 948 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 NRP1O14786 923 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 LONP2Q86WA8 852 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 NT5C3BQ969T7 300 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 AP5M1Q9H0R1 490 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 PRDM12Q9H4Q4 367 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 RCOR3Q9P2K3 495 aaPredicted RBP25.66■■□□□ 1.7
RAB40C-204ENST00000538492 STAP1Q9ULZ2 295 aa25.66■■□□□ 1.7
RAB40C-204ENST00000538492 FAM237BA0A1B0GVD1 139 aa25.65■■□□□ 1.7
RAB40C-204ENST00000538492 PSMB4P28070 264 aa25.65■■□□□ 1.7
RAB40C-204ENST00000538492 FDFT1P37268 417 aa25.65■■□□□ 1.7
RAB40C-204ENST00000538492 CCNFP41002 786 aa25.65■■□□□ 1.7
RAB40C-204ENST00000538492 ZBTB16Q05516 673 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms