RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TRIM49BA6NDI0 452 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 TMEM8BA6NDV4 472 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 TULP2O00295 520 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 GIPC1O14908 333 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 TIMM44O43615 452 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 SYNCRIPO60506 623 aaKnown RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 OPHN1O60890 802 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 IGLV3-19P01714 112 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 PROS1P07225 676 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 C7P10643 843 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 CD19P15391 556 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 GNSP15586 552 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 CD6P30203 668 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 OXTRP30559 389 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 IL12RB1P42701 662 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 PMS1P54277 932 aaKnown RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 DAOAP59103 153 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 SEMA3BQ13214 749 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 ZNF234Q14588 700 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 MEA1Q16626 185 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 LCLAT1Q6UWP7 414 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 FMNL3Q8IVF7 1028 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.03□□□□□ -0.96
DDB1-212ENST00000538470 RBBP8NLQ8NC74 664 aaPredicted RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 DEFB124Q8NES8 71 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 CADM4Q8NFZ8 388 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 DDI1Q8WTU0 396 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 P2RY11Q96G91 374 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 ZNF419Q96HQ0 510 aaPredicted RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 ZDHHC5Q9C0B5 715 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 PCED1AQ9H1Q7 454 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
DDB1-212ENST00000538470 ELOVL2Q9NXB9 296 aa9.03□□□□□ -0.96
DDB1-212ENST00000538470 BICDL2A1A5D9 508 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 YJEFN3A6XGL0 299 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 MEI4A8MW99 385 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 WASH3PC4AMC7 463 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 E7ENQ6 273 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 M0QYV0 167 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 IRAK2O43187 625 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 FBXO21O94952 628 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 GNA14O95837 355 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 IGLV3-27P01718 113 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 NCAM1P13591 858 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 GCNT1Q02742 428 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 ARID5AQ03989 594 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 RING1Q06587 406 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 LRMPQ12912 555 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 FOXC1Q12948 553 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 SLC14A1Q13336 389 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 CNGA2Q16280 664 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 CCDC40Q4G0X9 1142 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 MPP7Q5T2T1 576 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 TMEM270Q6UE05 265 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 UNQ6494/PRO21346Q6UXR6 183 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 UNC45BQ8IWX7 931 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 AHI1Q8N157 1196 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 MINDY1Q8N5J2 469 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 PRCCQ92733 491 aaPredicted RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 SIPA1Q96FS4 1042 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 TOE1Q96GM8 510 aaKnown RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 HSFY1Q96LI6 401 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 TRIM62Q9BVG3 475 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 GTPBP2Q9BX10 602 aaKnown RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 CIPCQ9C0C6 399 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 MKRN2Q9H000 416 aaKnown RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 SLC6A17Q9H1V8 727 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 CD93Q9NPY3 652 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 ITM2CQ9NQX7 267 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 WSB2Q9NYS7 404 aaPredicted RBP9.02□□□□□ -0.97
DDB1-212ENST00000538470 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
DDB1-212ENST00000538470 WASF3Q9UPY6 502 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 PCDHB4Q9Y5E5 795 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 NUMA1Q14980 2115 aa9.02□□□□□ -0.97
DDB1-212ENST00000538470 A0A1B0GTW7 788 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 TYW5A2RUC4 315 aaKnown RBP9.01□□□□□ -0.97
DDB1-212ENST00000538470 H0Y626 953 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 KRT37O76014 449 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 TRIM16O95361 564 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 LTFP02788 710 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 ACADMP11310 421 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 PRKCHP24723 683 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 HLA-FP30511 346 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 SLC11A2P49281 568 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 TPMTP51580 245 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 COPAP53621 1224 aa9.01□□□□□ -0.97
DDB1-212ENST00000538470 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
DDB1-212ENST00000538470 ZBTB16Q05516 673 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms