RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 C2orf78A6NCI8 922 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 IRAK2O43187 625 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 COCHO43405 550 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ENDOD1O94919 500 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZDHHC11BP0C7U3 371 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TCF4P15884 667 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■■□ 22.9
TNFRSF1A-211ENST00000538363 PEX5P50542 639 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TUBP50607 506 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TPI1P60174 286 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SLC25A11Q02978 314 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TEAD2Q15562 447 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RAB6CQ53S08 254 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TFDP3Q5H9I0 405 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 EFHBQ8N7U6 833 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ALG3Q92685 438 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CD101Q93033 1021 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 NT5C3BQ969T7 300 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PLD4Q96BZ4 506 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PGAP3Q96FM1 320 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MS4A14Q96JA4 679 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CYP2S1Q96SQ9 504 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CARD6Q9BX69 1037 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 OSBPL8Q9BZF1 889 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DCLK3Q9C098 648 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RAB6CQ9H0N0 254 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZMYM5Q9UJ78 669 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MRFAP1Q9Y605 127 aa11.05□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MYO7AQ13402 2215 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GREB1Q4ZG55 1949 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 APOL1O14791 398 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PAGE1O75459 146 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HOXB8P17481 243 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PFKLP17858 780 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FSHRP23945 695 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 IL1R2P27930 398 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PGFP49763 221 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF135P52742 658 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 NTHL1P78549 312 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HYAL1Q12794 435 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 NNTQ13423 1086 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GRIN2CQ14957 1233 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ANKRD54Q6NXT1 300 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MFSD7Q6UXD7 560 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CHSY1Q86X52 802 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF276Q8N554 614 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ARFGAP1Q8N6T3 406 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ACTRT1Q8TDG2 376 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ING5Q8WYH8 240 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 NTAN1Q96AB6 310 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RPGRIP1Q96KN7 1286 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 BTN2A3PQ96KV6 586 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RIPOR3Q96MK2 946 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HAPLN3Q96S86 360 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TASP1Q9H6P5 420 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CATSPERBQ9H7T0 1116 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GKN1Q9NS71 199 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HOMER3Q9NSC5 361 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 OR12D3Q9UGF7 316 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CPQQ9Y646 472 aa11.04□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KCNU1A8MYU2 1149 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 F5H5T6 163 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SNPHO15079 494 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CST8O60676 142 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KRT10P13645 584 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CORO1AP31146 461 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 L1CAMP32004 1257 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AMPD2Q01433 879 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 AADACL2Q6P093 401 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 C1orf228Q6PIY5 440 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GAREM2Q75VX8 874 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 DENND1CQ8IV53 801 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KLHL7Q8IXQ5 586 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PYROXD2Q8N2H3 581 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 VN1R2Q8NFZ6 395 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PPM1EQ8WY54 764 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms