RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SLC45A4Q5BKX6 768 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RETSATQ6NUM9 610 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 C4orf22Q6V702 233 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CEP128Q6ZU80 1094 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HTR3DQ70Z44 454 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TMC6Q7Z403 805 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 GRASPQ7Z6J2 395 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PCGF5Q86SE9 256 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 OSTM1Q86WC4 334 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SLC7A5P1Q8MH63 180 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FUKQ8N0W3 1084 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TTC13Q8NBP0 860 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 GIMAP7Q8NHV1 300 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 KIF18AQ8NI77 898 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 EZH1Q92800 747 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RBM41Q96IZ5 413 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MAK16Q9BXY0 300 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PCED1AQ9H1Q7 454 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 S1PR5Q9H228 398 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 GANQ9H2C0 597 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SMOC2Q9H3U7 446 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DUS2Q9NX74 493 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MARK1Q9P0L2 795 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DEC1Q9P2X7 70 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DUSP12Q9UNI6 340 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TLR6Q9Y2C9 796 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SIK3Q9Y2K2 1263 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HCN4Q9Y3Q4 1203 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SPO11Q9Y5K1 396 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TIMM13Q9Y5L4 95 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 USP3Q9Y6I4 520 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MYBPHLA2RUH7 354 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SIGLEC16A6NMB1 481 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MEIS3P2A8K0S8 358 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HIDE1A8MVS5 230 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TNFRSF10AO00220 468 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SPTLC1O15269 473 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DAPK3O43293 454 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM253P0C7T8 217 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZDHHC11BP0C7U3 371 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MATKP42679 507 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MAGEA1P43355 309 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MAPKAPK2P49137 400 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RPL34P49207 117 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CCR3P51677 355 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 GUCY2FP51841 1108 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CENPCQ03188 943 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZBTB16Q05516 673 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF177Q13360 481 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PEX6Q13608 980 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 LAMB3Q13751 1172 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ARID5BQ14865 1188 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC85BQ15834 202 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ANO4Q32M45 955 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DCAF6Q58WW2 860 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RAB41Q5JT25 222 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC122Q5T0U0 273 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FAM102AQ5T9C2 384 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 LRRC38Q5VT99 294 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FAM46CQ5VWP2 391 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 OLFML1Q6UWY5 402 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CLEC20AQ6ZU45 233 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 C14orf80Q86SX3 495 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 DHX40Q8IX18 779 aaKnown RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 OR10T2Q8NGX3 314 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 OSCP1Q8WVF1 389 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PGAP3Q96FM1 320 aaPredicted RBP3.71□□□□□ -1.82
PTPN22-211ENST00000538253 HAPLN3Q96S86 360 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FGFBP2Q9BYJ0 223 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ULBP1Q9BZM6 244 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 NLRC4Q9NPP4 1024 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CRTAC1Q9NQ79 661 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 RAD18Q9NS91 495 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 FAM49BQ9NUQ9 324 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MYO1AQ9UBC5 1043 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 TBK1Q9UHD2 729 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SLC25A13Q9UJS0 675 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 IKBKGQ9Y6K9 419 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC163A0A0D9SF12 145 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SLC12A8A0AV02 714 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF840PA6NDX5 716 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ANHXE9PGG2 379 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 I3L4J1 428 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PER2O15055 1255 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CYP26A1O43174 497 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PSMD3O43242 534 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 MFAP3LO75121 409 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 B3GALNT1O75752 331 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 F11P03951 625 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 LINC00271P0C7V0 271 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 SLC9A1P19634 815 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 CYP2F1P24903 491 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 OXTRP30559 389 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 PCK1P35558 622 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 IRS1P35568 1242 aa3.71□□□□□ -1.82
PTPN22-211ENST00000538253 ACTN2P35609 894 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms