RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 BRWD3Q6RI45 1802 aa11.01□□□□□ -0.65
RTN3-208ENST00000537981 ARHGEF37A1IGU5 675 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CCDC162PA2VCL2 907 aa11□□□□□ -0.65
RTN3-208ENST00000537981 GTPBP10A4D1E9 387 aaKnown RBP11□□□□□ -0.65
RTN3-208ENST00000537981 I3L4J1 428 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SOCS7O14512 581 aa11□□□□□ -0.65
RTN3-208ENST00000537981 ARHGAP33O14559 1287 aa11□□□□□ -0.65
RTN3-208ENST00000537981 TEX28O15482 410 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CLOCKO15516 846 aa11□□□□□ -0.65
RTN3-208ENST00000537981 DYNC1LI2O43237 492 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 ZBTB14O43829 449 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CALUO43852 315 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 RSL1D1O76021 490 aaKnown RBP11□□□□□ -0.65
RTN3-208ENST00000537981 MTA2O94776 668 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SEC24DO94855 1032 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 AKR1B1P15121 316 aa11□□□□□ -0.65
RTN3-208ENST00000537981 RFC1P35251 1148 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 MXI1P50539 228 aa11□□□□□ -0.65
RTN3-208ENST00000537981 AP3M2P53677 418 aa11□□□□□ -0.65
RTN3-208ENST00000537981 GDF10P55107 478 aa11□□□□□ -0.65
RTN3-208ENST00000537981 MYL7Q01449 175 aa11□□□□□ -0.65
RTN3-208ENST00000537981 GALNT2Q10471 571 aa11□□□□□ -0.65
RTN3-208ENST00000537981 PRKG1Q13976 671 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SLC9A4Q6AI14 798 aa11□□□□□ -0.65
RTN3-208ENST00000537981 TATDN1Q6P1N9 297 aa11□□□□□ -0.65
RTN3-208ENST00000537981 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
RTN3-208ENST00000537981 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 LILRB4Q8NHJ6 448 aa11□□□□□ -0.65
RTN3-208ENST00000537981 EXD1Q8NHP7 514 aa11□□□□□ -0.65
RTN3-208ENST00000537981 PRR7Q8TB68 274 aa11□□□□□ -0.65
RTN3-208ENST00000537981 ADAM32Q8TC27 787 aa11□□□□□ -0.65
RTN3-208ENST00000537981 NT5C1BQ96P26 610 aa11□□□□□ -0.65
RTN3-208ENST00000537981 ANO3Q9BYT9 981 aa11□□□□□ -0.65
RTN3-208ENST00000537981 PPCSQ9HAB8 311 aa11□□□□□ -0.65
RTN3-208ENST00000537981 C6orf203Q9P0P8 240 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 CDH7Q9ULB5 785 aa11□□□□□ -0.65
RTN3-208ENST00000537981 PCDHA12Q9UN75 941 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SSX2IPQ9Y2D8 614 aa11□□□□□ -0.65
RTN3-208ENST00000537981 KIAA1551Q9HCM1 1747 aa11□□□□□ -0.65
RTN3-208ENST00000537981 TAF1P21675 1872 aa11□□□□□ -0.65
RTN3-208ENST00000537981 C10orf71Q711Q0 1435 aa11□□□□□ -0.65
RTN3-208ENST00000537981 FRMPD2Q68DX3 1309 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
RTN3-208ENST00000537981 NOP56O00567 594 aaKnown RBP11□□□□□ -0.65
RTN3-208ENST00000537981 ZBTB39O15060 712 aa11□□□□□ -0.65
RTN3-208ENST00000537981 KCNQ2O43526 872 aa11□□□□□ -0.65
RTN3-208ENST00000537981 DCXO43602 365 aa11□□□□□ -0.65
RTN3-208ENST00000537981 JRKO75564 520 aa11□□□□□ -0.65
RTN3-208ENST00000537981 NCF2P19878 526 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 CXCR2P25025 360 aa11□□□□□ -0.65
RTN3-208ENST00000537981 MAPK4P31152 587 aa11□□□□□ -0.65
RTN3-208ENST00000537981 DPP6P42658 865 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SLC1A1P43005 524 aa11□□□□□ -0.65
RTN3-208ENST00000537981 SLC10A2Q12908 348 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 OXA1LQ15070 435 aa11□□□□□ -0.65
RTN3-208ENST00000537981 LSM12Q3MHD2 195 aaKnown RBP11□□□□□ -0.65
RTN3-208ENST00000537981 MGAT5BQ3V5L5 792 aa11□□□□□ -0.65
RTN3-208ENST00000537981 UBE2UQ5VVX9 321 aa11□□□□□ -0.65
RTN3-208ENST00000537981 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
RTN3-208ENST00000537981 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CARM1Q86X55 608 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
RTN3-208ENST00000537981 FAM47BQ8NA70 645 aa11□□□□□ -0.65
RTN3-208ENST00000537981 BHLHE22Q8NFJ8 381 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 OR7G1Q8NGA0 311 aa11□□□□□ -0.65
RTN3-208ENST00000537981 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.651e-25■■■■□ 25.8
RTN3-208ENST00000537981 ACDQ96AP0 544 aa11□□□□□ -0.65
RTN3-208ENST00000537981 RMND5BQ96G75 393 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 DCAF5Q96JK2 942 aa11□□□□□ -0.65
RTN3-208ENST00000537981 C7orf26Q96N11 449 aa11□□□□□ -0.65
RTN3-208ENST00000537981 HAUS8Q9BT25 410 aa11□□□□□ -0.65
RTN3-208ENST00000537981 ACSS3Q9H6R3 686 aa11□□□□□ -0.65
RTN3-208ENST00000537981 MARCH7Q9H992 704 aa11□□□□□ -0.65
RTN3-208ENST00000537981 CXorf21Q9HAI6 301 aa11□□□□□ -0.65
RTN3-208ENST00000537981 MKS1Q9NXB0 559 aa11□□□□□ -0.65
RTN3-208ENST00000537981 TRMT112Q9UI30 125 aaKnown RBP11□□□□□ -0.65
RTN3-208ENST00000537981 PADI4Q9UM07 663 aa11□□□□□ -0.65
RTN3-208ENST00000537981 MYRFQ9Y2G1 1151 aa11□□□□□ -0.65
RTN3-208ENST00000537981 ASTN2O75129 1339 aaPredicted RBP11□□□□□ -0.65
RTN3-208ENST00000537981 CRY1Q16526 586 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 BBS9Q3SYG4 887 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 SIGIRRQ6IA17 410 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 RWDD4Q6NW29 188 aaKnown RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 RALGPS2Q86X27 583 aaPredicted RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 VPS37AQ8NEZ2 397 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 FBXL18Q96ME1 805 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 IL12RB2Q99665 862 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 CLK4Q9HAZ1 481 aaKnown RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 PNPOQ9NVS9 261 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 MCM9Q9NXL9 1143 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TBC1D14Q9P2M4 693 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 ESYT2A0FGR8 921 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 CXorf49A8MYA2 514 aaPredicted RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 AIM2O14862 343 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 LIASO43766 372 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TMEM63AO94886 807 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 PTPN2P17706 415 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms