RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ERGIC2Q96RQ1 377 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 RFX7Q2KHR2 1363 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 MYO5AQ9Y4I1 1855 aaKnown RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SHOX2O60902 331 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 UNC5CO95185 931 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 LYNP07948 512 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 CDK17Q00537 523 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 TOP3AQ13472 1001 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF671Q8TAW3 534 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SEMA4DQ92854 862 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PHF12Q96QT6 1004 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 PLA2G4CQ9UP65 541 aa5.81□□□□□ -1.48
CSMD1-215ENST00000537824 AFF2P51816 1311 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 E9PCH4 1651 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 F8W810 466 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GDF11O95390 407 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ADORA2BP29275 332 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 NAMPTP43490 491 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ATN1P54259 1190 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RIPK1Q13546 671 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FAM83EQ2M2I3 478 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RABL6Q3YEC7 729 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RBM43Q6ZSC3 357 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SRPK1Q96SB4 655 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 OSBPL11Q9BXB4 747 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 STARD13Q9Y3M8 1113 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF609O15014 1411 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SRRM3A6NNA2 597 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 AXIN1O15169 862 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PSMD3O43242 534 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 NPR3P17342 541 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RAB25P57735 213 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TRPC4APQ8TEL6 797 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MARK4Q96L34 752 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GPATCH1Q9BRR8 931 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 C21orf2O43822 256 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TOP3BO95985 862 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CCNE2O96020 404 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 BMP3P12645 472 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 UQCRBP14927 111 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CPA3P15088 417 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RGS7P49802 495 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF235Q14590 738 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GRM4Q14833 912 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GJB7Q6PEY0 223 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TUBGCP5Q96RT8 1024 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 BNIP3LO60238 219 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TKTP29401 623 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PSME3P61289 254 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SPIRE1Q08AE8 756 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GRM1Q13255 1194 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 NFYCQ13952 458 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FRG1Q14331 258 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 DNAJC10Q8IXB1 793 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 EFHBQ8N7U6 833 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TADA1Q96BN2 335 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 STAP1Q9ULZ2 295 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MRASO14807 208 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SNX3O60493 162 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 POLBP06746 335 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RPA1P27694 616 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PRELPP51888 382 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PDXDC2PQ6P474 469 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PAGE2Q7Z2X7 111 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ITFG1Q8TB96 612 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FEZF2Q8TBJ5 459 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SAMD9Q5K651 1589 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MYBP10242 640 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF568Q3ZCX4 644 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ATP6AP1LQ52LC2 224 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 OLFML2AQ68BL7 652 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FAAH2Q6GMR7 532 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CAMKK1Q8N5S9 505 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FAM13CQ8NE31 585 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GRPEL2Q8TAA5 225 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MAGEE2Q8TD90 523 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CABLES1Q8TDN4 633 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 NSMCE2Q96MF7 247 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FAM193BQ96PV7 902 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 COPS4Q9BT78 406 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RNF112Q9ULX5 631 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ABCG2Q9UNQ0 655 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ERVK-7P63135 1459 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FAM172BPA6NC97 362 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 KHDRBS3O75525 346 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CSPG5O95196 566 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GPC3P51654 580 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GSCP56915 257 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CAMK1DQ8IU85 385 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SLC44A2Q8IWA5 706 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SEPT12Q8IYM1 358 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 ASAP3Q8TDY4 903 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 UCMAQ8WVF2 138 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CCDC115Q96NT0 180 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TTYH1Q9H313 450 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MARCH7Q9H992 704 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SPDYCQ5MJ68 293 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 HMBOX1Q6NT76 420 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 NCCRP1Q6ZVX7 275 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms