RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SLC12A4Q9UP95 1085 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 STARD13Q9Y3M8 1113 aa16.18■□□□□ 0.18
MKS1-204ENST00000537529 YJEFN3A6XGL0 299 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 E7ENQ6 273 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 OPHN1O60890 802 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 DNAJC8O75937 253 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 LTFP02788 710 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 ALADP13716 330 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 PRKCHP24723 683 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 ADRA1BP35368 520 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 GLUD2P49448 558 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 CACNB2Q08289 660 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 SCAPQ12770 1279 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 DSC3Q14574 896 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 PAFAH1B3Q15102 231 aaKnown RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 KCNA10Q16322 511 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 CGB2Q6NT52 195 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 FAM47EQ6ZV65 393 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 PDZD4Q76G19 769 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 ZNF534Q76KX8 674 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 GPRIN1Q7Z2K8 1008 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 ZMIZ2Q8NF64 920 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 TMPRSS4Q9NRS4 437 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 KLHL14Q9P2G3 628 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 ZNF180Q9UJW8 692 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 DSEQ9UL01 958 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 GRID1Q9ULK0 1009 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 RNF103O00237 685 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 MGEA5O60502 916 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 APOEP02649 317 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 FYNP06241 537 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 PRKCZQ05513 592 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 AP1B1Q10567 949 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 GRIK3Q13003 919 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 TRIM32Q13049 653 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 DNAJC3Q13217 504 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 RNF43Q68DV7 783 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 LRRC6Q86X45 466 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 CTAGE3PQ8IX95 158 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 MYLPFQ96A32 169 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 PGAP3Q96FM1 320 aaPredicted RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 APOPT1Q96IL0 206 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 LGMNQ99538 433 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 EBNA1BP2Q99848 306 aaKnown RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 EIF2B3Q9NR50 452 aaKnown RBP16.17■□□□□ 0.18
MKS1-204ENST00000537529 HAUS2Q9NVX0 235 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 RAD54BQ9Y620 910 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 MAD1L1Q9Y6D9 718 aa16.17■□□□□ 0.18
MKS1-204ENST00000537529 A0A0U1RQF3 1178 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 KRT37O76014 449 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 USP17L7P0C7H9 530 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 SKIP12755 728 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 MLNP12872 115 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 NCAM1P13591 858 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 ARL13BQ3SXY8 428 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 LGSNQ5TDP6 509 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 UNC5AQ6ZN44 842 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
MKS1-204ENST00000537529 PPM1NQ8N819 430 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 KLHDC9Q8NEP7 349 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 IRGQQ8WZA9 623 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 APBB2Q92870 758 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 SIGLEC10Q96LC7 697 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 UROC1Q96N76 676 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 ACBD6Q9BR61 282 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 PAAF1Q9BRP4 392 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 CSNK1G1Q9HCP0 422 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 PHTF1Q9UMS5 762 aa16.16■□□□□ 0.18
MKS1-204ENST00000537529 GOLGA8RI6L899 631 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 DCLK1O15075 740 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 LPXNO60711 386 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 EDF1O60869 148 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 F9P00740 461 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 POMCP01189 267 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 C1QAP02745 245 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 CYP11A1P05108 521 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 RABGGTBP53611 331 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 TPI1P60174 286 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 SLC20A2Q08357 652 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 LPIN1Q14693 890 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 FBXW10Q5XX13 1052 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 COLGALT1Q8NBJ5 622 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 TCP10LQ8TDR4 215 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 P2RY11Q96G91 374 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 WDR6Q9NNW5 1121 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 TMEM30AQ9NV96 361 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 DDIT4Q9NX09 232 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 FBXW11Q9UKB1 542 aa16.15■□□□□ 0.18
MKS1-204ENST00000537529 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
MKS1-204ENST00000537529 PCDHA11Q9Y5I1 949 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms