RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 ATRIPQ8WXE1 791 aa18.01■□□□□ 0.47
GPN3-202ENST00000537466 NKD2Q969F2 451 aaPredicted RBP18.01■□□□□ 0.47
GPN3-202ENST00000537466 HHIPQ96QV1 700 aa18.01■□□□□ 0.47
GPN3-202ENST00000537466 SLC8A2Q9UPR5 921 aa18.01■□□□□ 0.47
GPN3-202ENST00000537466 PRR23AA6NEV1 266 aa18■□□□□ 0.47
GPN3-202ENST00000537466 PRRT4C9JH25 899 aa18■□□□□ 0.47
GPN3-202ENST00000537466 ACSL4O60488 711 aa18■□□□□ 0.47
GPN3-202ENST00000537466 SERPINC1P01008 464 aa18■□□□□ 0.47
GPN3-202ENST00000537466 CYP1A1P04798 512 aaPredicted RBP18■□□□□ 0.47
GPN3-202ENST00000537466 CYBBP04839 570 aa18■□□□□ 0.47
GPN3-202ENST00000537466 SLC6A4P31645 630 aa18■□□□□ 0.47
GPN3-202ENST00000537466 EIF4EBP2Q13542 120 aaPredicted RBP18■□□□□ 0.47
GPN3-202ENST00000537466 NR1I3Q14994 352 aa18■□□□□ 0.47
GPN3-202ENST00000537466 PREPLQ4J6C6 727 aaPredicted RBP18■□□□□ 0.47
GPN3-202ENST00000537466 NADSYN1Q6IA69 706 aa18■□□□□ 0.47
GPN3-202ENST00000537466 RFWD3Q6PCD5 774 aa18■□□□□ 0.47
GPN3-202ENST00000537466 XYLT1Q86Y38 959 aa18■□□□□ 0.47
GPN3-202ENST00000537466 IL17RCQ8NAC3 791 aa18■□□□□ 0.47
GPN3-202ENST00000537466 ZNF397Q8NF99 534 aaPredicted RBP18■□□□□ 0.47
GPN3-202ENST00000537466 ACDQ96AP0 544 aa18■□□□□ 0.47
GPN3-202ENST00000537466 C18orf8Q96DM3 657 aa18■□□□□ 0.47
GPN3-202ENST00000537466 XPO7Q9UIA9 1087 aaKnown RBP18■□□□□ 0.47
GPN3-202ENST00000537466 MMP17Q9ULZ9 603 aa18■□□□□ 0.47
GPN3-202ENST00000537466 DAB1O75553 588 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 KLF8O95600 359 aaPredicted RBP17.99■□□□□ 0.47
GPN3-202ENST00000537466 HOXD9P28356 352 aaPredicted RBP17.99■□□□□ 0.47
GPN3-202ENST00000537466 SLC11A2P49281 568 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 FANCCQ00597 558 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 MPPE1Q53F39 396 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 ZC3H12AQ5D1E8 599 aaKnown RBP17.99■□□□□ 0.47
GPN3-202ENST00000537466 ZDHHC17Q8IUH5 632 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 TXNDC5Q8NBS9 432 aaKnown RBP17.99■□□□□ 0.47
GPN3-202ENST00000537466 BAP1Q92560 729 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 AZIN2Q96A70 460 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 MYEOVQ96EZ4 313 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 PCDHB18PQ96TA0 734 aa17.99■□□□□ 0.47
GPN3-202ENST00000537466 ZFHX2Q9C0A1 2572 aaPredicted RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 SYNJ2BP-COX16A0A087WUM0 186 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 A0A1W2PQC6 194 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 SGK1O00141 431 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 GFRA3O60609 400 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 CAVIN2O95810 425 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 MOCS2O96007 188 aaPredicted RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.47
GPN3-202ENST00000537466 HOXA6P31267 233 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 RNASE9P60153 205 aaKnown RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 TPM4P67936 248 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 CDK17Q00537 523 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 SRSF5Q13243 272 aaKnown RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 NFKBIBQ15653 356 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 GEN1Q17RS7 908 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 PIK3R6Q5UE93 754 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 LONP2Q86WA8 852 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 ZNF513Q8N8E2 541 aaPredicted RBP17.98■□□□□ 0.47
GPN3-202ENST00000537466 SLC30A5Q8TAD4 765 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 ADAM33Q9BZ11 813 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 FAM204AQ9H8W3 233 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 COX16Q9P0S2 106 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 CALCOCO1Q9P1Z2 691 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 SLC27A6Q9Y2P4 619 aa17.98■□□□□ 0.47
GPN3-202ENST00000537466 ADAM23O75077 832 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 UNGP13051 313 aaPredicted RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 TFE3P19532 575 aaPredicted RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 NOS2P35228 1153 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 ZNF445P59923 1031 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 TMEM92Q6UXU6 159 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 NUDT18Q6ZVK8 323 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 SUMF1Q8NBK3 374 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 TMA16Q96EY4 203 aaKnown RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 PRICKLE1Q96MT3 831 aaPredicted RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 SEMA4AQ9H3S1 761 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 DDIT4Q9NX09 232 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 STARD13Q9Y3M8 1113 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 SPAG17Q6Q759 2223 aa17.97■□□□□ 0.47
GPN3-202ENST00000537466 MUC22E2RYF6 1773 aaPredicted RBP17.97■□□□□ 0.47
GPN3-202ENST00000537466 LRRC53A6NM62 1247 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 GOLGA6L19H0YKK7 550 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 HRO43593 1189 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 LMNAP02545 664 aaKnown RBP17.96■□□□□ 0.47
GPN3-202ENST00000537466 APOEP02649 317 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 SCNN1AP37088 669 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 MATKP42679 507 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 CRY1Q16526 586 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 TRNP1Q6NT89 227 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 IRF2BP2Q7Z5L9 587 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 WDR5BQ86VZ2 330 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 CAMKK1Q8N5S9 505 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 MSANTD4Q8NCY6 345 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 ACOX2Q99424 681 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 C11orf70Q9BRQ4 267 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 TTYH3Q9C0H2 523 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.96■□□□□ 0.47
GPN3-202ENST00000537466 FRYLO94915 3013 aa17.96■□□□□ 0.47
GPN3-202ENST00000537466 M0QYT0 321 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms