RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ADAM33Q9BZ11 813 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 GTPBP4Q9BZE4 634 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 CIPCQ9C0C6 399 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ITM2CQ9NQX7 267 aa20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 WSB2Q9NYS7 404 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 USP36Q9P275 1121 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HBS1LQ9Y450 684 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TIMM44O43615 452 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TBXAS1P24557 533 aaPredicted RBP20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SIM1P81133 766 aaPredicted RBP20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ARID5AQ03989 594 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 LRMPQ12912 555 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ZNF234Q14588 700 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 BSPRYQ5W0U4 402 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 BHLHA9Q7RTU4 235 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TMPRSS6Q8IU80 811 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SIX6OS1Q8N1H7 587 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 UBA3Q8TBC4 463 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 KCTD13Q8WZ19 329 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SMARCE1Q969G3 411 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SLC35C1Q96A29 364 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SIPA1Q96FS4 1042 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TOE1Q96GM8 510 aaKnown RBP20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 DNAAF2Q9NVR5 837 aaKnown RBP20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 KIAA1257Q9ULG3 409 aa20.56■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SPAARA0A1B0GVQ0 90 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TRIM49BA6NDI0 452 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 MEI4A8MW99 385 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SETSIPP0DME0 302 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 MAOBP27338 520 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 OXTRP30559 389 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ZNF445P59923 1031 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 UBR7Q8N806 425 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 RBBP8NLQ8NC74 664 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 OR2I1PQ8NGU4 316 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SPATA20Q8TB22 786 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 EDEM1Q92611 657 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PRCCQ92733 491 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 GPR174Q9BXC1 333 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ABCC13Q9NSE7 274 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SFMBT1Q9UHJ3 866 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 RALYQ9UKM9 306 aaKnown RBP20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 NFE2L3Q9Y4A8 694 aa20.55■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ANKRD11Q6UB99 2663 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 YJEFN3A6XGL0 299 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 E7ENQ6 273 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 O00370 1275 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TSPAN3O60637 253 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 EPHX1P07099 455 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ACADMP11310 421 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 NCAM1P13591 858 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HOXD9P28356 352 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TPMTP51580 245 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TMEM215Q68D42 235 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SERPINA13PQ6UXR4 307 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SCML4Q8N228 414 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ENGASEQ8NFI3 743 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 CADM4Q8NFZ8 388 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SORCS1Q8WY21 1168 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 METTL14Q9HCE5 456 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 CNGB3Q9NQW8 809 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HOOK1Q9UJC3 728 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 STOML2Q9UJZ1 356 aa20.54■□□□□ 0.88
TNFRSF1B-204ENST00000536782 CKAP5Q14008 2032 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 KCNJ18B7U540 433 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 LATS1O95835 1130 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PAEPP09466 180 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 LCP1P13796 627 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 CD59P13987 128 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PRKCHP24723 683 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 RDXP35241 583 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 FMO5P49326 533 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 COPAP53621 1224 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 SLC14A1Q13336 389 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 STIM1Q13586 685 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HNRNPDQ14103 355 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ADGRF1Q5T601 910 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 LCLAT1Q6UWP7 414 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 KDF1Q8NAX2 398 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 DNASE2BQ8WZ79 361 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TMA16Q96EY4 203 aaKnown RBP20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 FREM2Q5SZK8 3169 aa20.53■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ATRXP46100 2492 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 A0A1B0GTW7 788 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PSMA7O14818 248 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HYAL3O43820 417 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 IGLV3-19P01714 112 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 HLA-FP30511 346 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 DAOAP59103 153 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 PKDCCQ504Y2 493 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 WFIKKN2Q8TEU8 576 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 GATA6Q92908 595 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 TIGD1Q96MW7 591 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 NT5C1BQ96P26 610 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 NUP58Q9BVL2 599 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ZDHHC5Q9C0B5 715 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 ZMIZ1Q9ULJ6 1067 aa20.52■□□□□ 0.88
TNFRSF1B-204ENST00000536782 NEUROG3Q9Y4Z2 214 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms