RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 A0A1W2PQF6 199 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 SLC12A8A0AV02 714 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 MED19A0JLT2 244 aaPredicted RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 BIN1O00499 593 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 DCLK1O15075 740 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 TRIM24O15164 1050 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 FBXO21O94952 628 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 DPP6P42658 865 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 PMF1Q6P1K2 205 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 SIX6OS1Q8N1H7 587 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 RBBP8NLQ8NC74 664 aaPredicted RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 UBA3Q8TBC4 463 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 KAT5Q92993 513 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 IPO9Q96P70 1041 aaKnown RBP11.28□□□□□ -0.6
CCDC60-202ENST00000535685 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 EPG5Q9HCE0 2579 aa11.28□□□□□ -0.6
CCDC60-202ENST00000535685 CACNA1BQ00975 2339 aa11.27□□□□□ -0.6
CCDC60-202ENST00000535685 CHD8Q9HCK8 2581 aa11.27□□□□□ -0.6
CCDC60-202ENST00000535685 NUMA1Q14980 2115 aa11.27□□□□□ -0.6
CCDC60-202ENST00000535685 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 YJEFN3A6XGL0 299 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 E7ENQ6 273 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 GDF9O60383 454 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF217O75362 1048 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 CAVIN2O95810 425 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 CYBBP04839 570 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 HOXB2P14652 356 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 BCKDHBP21953 392 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 HOXD12P35452 270 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 GPD2P43304 727 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 MFAP3P55082 362 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 STX17P56962 302 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 RING1Q06587 406 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 NNTQ13423 1086 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 EIF4HQ15056 248 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 SF3A2Q15428 464 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 MPP7Q5T2T1 576 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 EGFLAMQ63HQ2 1017 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 SDE2Q6IQ49 451 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 CLEC17AQ6ZS10 378 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 TOGARAM2Q6ZUX3 1019 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 IRF2BP1Q8IU81 584 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 DENND1CQ8IV53 801 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 ARHGEF19Q8IW93 802 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 RNF139Q8WU17 664 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 NDRG1Q92597 394 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 MED15Q96RN5 788 aa11.27□□□□□ -0.61
CCDC60-202ENST00000535685 INTS2Q9H0H0 1204 aaKnown RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 EVLQ9UI08 416 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-202ENST00000535685 M0QYV0 167 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 SART1O43290 800 aaKnown RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 TIMM44O43615 452 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 GABRG2P18507 467 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 BRD2P25440 801 aaKnown RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 GBP1P32455 592 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 ACADSBP45954 432 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 CREB5Q02930 508 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 AASDHQ4L235 1098 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 MPPE1Q53F39 396 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 SLC36A4Q6YBV0 504 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 CHPFQ8IZ52 775 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 UCMAQ8WVF2 138 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 ACOX2Q99424 681 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
CCDC60-202ENST00000535685 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 MBD1Q9UIS9 605 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-202ENST00000535685 MAP1BP46821 2468 aaKnown RBP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 DCDC2BA2VCK2 349 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 IRAK2O43187 625 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 LTFP02788 710 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 HMBSP08397 361 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 LCP1P13796 627 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 HOXD9P28356 352 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-202ENST00000535685 GEN1Q17RS7 908 aa11.25□□□□□ -0.61
CCDC60-202ENST00000535685 CT47A1Q5JQC4 288 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms