RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 EPG5Q9HCE0 2579 aa16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 ATXN2Q99700 1313 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-204ENST00000535313 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 PIK3R2O00459 728 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 MSI1O43347 362 aaKnown RBP16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 TSPAN3O60637 253 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 NDUFS2O75306 463 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 CFIP05156 583 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 KRT5P13647 590 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 IL12RB1P42701 662 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 DUOXA1Q1HG43 343 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 UAP1L1Q3KQV9 507 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 SLC23A3Q6PIS1 610 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 RABEPKQ7Z6M1 372 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 TMA16Q96EY4 203 aaKnown RBP16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 INTS2Q9H0H0 1204 aaKnown RBP16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 SLC6A17Q9H1V8 727 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 STOML2Q9UJZ1 356 aa16.88■□□□□ 0.29
CLSTN3-204ENST00000535313 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 CALCAP01258 141 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 LTFP02788 710 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 HOXD9P28356 352 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 SLC11A2P49281 568 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 NOVA1P51513 510 aaKnown RBP16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 ENPP2Q13822 863 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 ZNF234Q14588 700 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 FUT11Q495W5 492 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 PEAR1Q5VY43 1037 aaPredicted RBP16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 NUGGCQ68CJ6 796 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 MIS12Q9H081 205 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 PRDM16Q9HAZ2 1276 aa16.87■□□□□ 0.29
CLSTN3-204ENST00000535313 SART1O43290 800 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 GABBR2O75899 941 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 ENGP17813 658 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 PI4KAP42356 2102 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 MAPK8P45983 427 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 ATXN3P54252 364 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 UBE2HP62256 183 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 SERPINA13PQ6UXR4 307 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 ENOSF1Q7L5Y1 443 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 METTL3Q86U44 580 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 WFIKKN2Q8TEU8 576 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 CLEC4CQ8WTT0 213 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 SORCS1Q8WY21 1168 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 FOXJ1Q92949 421 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 HSPA12BQ96MM6 686 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 ST7Q9NRC1 585 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 KIAA1468Q9P260 1216 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 ANGPTL2Q9UKU9 493 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 SLC6A14Q9UN76 642 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 CNTN6Q9UQ52 1028 aa16.86■□□□□ 0.29
CLSTN3-204ENST00000535313 MED7O43513 233 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 EPHX1P07099 455 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 SERPINF2P08697 491 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 NCAM1P13591 858 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 CD6P30203 668 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 ACADSBP45954 432 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 TBX4P57082 545 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 CAMK4Q16566 473 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 SYCP2LQ5T4T6 812 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 SH3PXD2AQ5TCZ1 1133 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 TMPRSS6Q8IU80 811 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 SLC41A1Q8IVJ1 513 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 RGL4Q8IZJ4 473 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 PRCCQ92733 491 aaPredicted RBP16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 FAM149B1Q96BN6 582 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 SIPA1Q96FS4 1042 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 ZNF419Q96HQ0 510 aaPredicted RBP16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 FAM81BQ96LP2 452 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 MKRN2Q9H000 416 aaKnown RBP16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 CD93Q9NPY3 652 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 PLA2G4CQ9UP65 541 aa16.85■□□□□ 0.29
CLSTN3-204ENST00000535313 TNRC6BQ9UPQ9 1833 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 IRAK2O43187 625 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 IGLV3-27P01718 113 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 ACADMP11310 421 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 CSRP1P21291 193 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 PRKCHP24723 683 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 PMLP29590 882 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 HLA-FP30511 346 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 OXTRP30559 389 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 GPD2P43304 727 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 RING1Q06587 406 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 FNDC3BQ53EP0 1204 aaKnown RBP16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 WDR45BQ5MNZ6 344 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 MPP7Q5T2T1 576 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 TMEM215Q68D42 235 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 CHST9Q7L1S5 443 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
CLSTN3-204ENST00000535313 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms