RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PSMD12O00232 456 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 O00370 1275 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 FAM228AQ86W67 206 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SERHL2Q9H4I8 314 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 TRPM5Q9NZQ8 1165 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 E9PCH4 1651 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 IRAK1P51617 712 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 AQP5P55064 265 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 TAF13Q15543 124 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 UGT3A1Q6NUS8 523 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 MYO1HQ8N1T3 1032 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SPPL2AQ8TCT8 520 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 MARK4Q96L34 752 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 ADI1Q9BV57 179 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 COQ6Q9Y2Z9 468 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 PTGES3LE9PB15 166 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SERPINB8P50452 374 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 BCAT1P54687 386 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SRP54P61011 504 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 CNTN2Q02246 1040 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 KCTD14Q9BQ13 255 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 LRRIQ3A6PVS8 624 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 F8VZ95 297 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 IGFBP4P22692 258 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 KCTD21Q4G0X4 260 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 AASDHQ4L235 1098 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 SLC30A9Q6PML9 568 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 CACTIN-AS1Q8N1I8 211 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 RBBP8Q99708 897 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 ROPN1BQ9BZX4 212 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 STN1Q9H668 368 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 ROPN1Q9HAT0 212 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 SYBUQ9NX95 663 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 MICAL2O94851 1124 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 EPHB3P54753 998 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 BOP1Q14137 746 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 NEDD8Q15843 81 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 RIPOR1Q6ZS17 1223 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 GPAMQ9HCL2 828 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 AAR2Q9Y312 384 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 TRPC5OSA6NMA1 111 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 CCT8P50990 548 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 PPP4CP60510 307 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 PRAMEF19Q5SWL8 479 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 FAM171A1Q5VUB5 890 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 TDRD5Q8NAT2 981 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 RUBCNQ92622 972 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 CLPBQ9H078 707 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 CDC42EP4Q9H3Q1 356 aaKnown RBP12.94□□□□□ -0.34
SPG11-203ENST00000535302 POLR1BQ9H9Y6 1135 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 NEUROD4Q9HD90 331 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 IL17RBQ9NRM6 502 aa12.94□□□□□ -0.34
SPG11-203ENST00000535302 FAM86B1E9PN63 330 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 H3BRB1 525 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PRKAG1P54619 331 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 STX4Q12846 297 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 Q4G0T1 1027 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 GFM2Q969S9 779 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 FAR2Q96K12 515 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 TBCDQ9BTW9 1192 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 TUT1Q9H6E5 874 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 TSPAN16Q9UKR8 245 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 LYVE1Q9Y5Y7 322 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PLK1P53350 603 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 MADCAM1Q13477 382 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 OASLQ15646 514 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 PRUNE1Q86TP1 453 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SPATC1LQ9H0A9 340 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PRKAG3Q9UGI9 489 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SPAG6O75602 509 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ACOX1Q15067 660 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
SPG11-203ENST00000535302 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 TMEM120AQ9BXJ8 343 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 SEMA6AQ9H2E6 1030 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 VIPAS39Q9H9C1 493 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PDGFCQ9NRA1 345 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PCDHGA3Q9Y5H0 932 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ZNF862O60290 1169 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 CLUP10909 449 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 PSMC3P17980 439 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 AMPD1P23109 780 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 KLRC2P26717 231 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
SPG11-203ENST00000535302 ATP6AP1LQ52LC2 224 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms