RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 FAM170AA1A519 330 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 ANTXRLA6NF34 631 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 NEDD8-MDP1E9PL57 170 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 O00370 1275 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 XPO1O14980 1071 aaKnown RBP9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 ATG13O75143 517 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 LETM1O95202 739 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 PDGFAP04085 211 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 APODP05090 189 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 PAEPP09466 180 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 MSX1P28360 303 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 OPRD1P41143 372 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 MFAP3P55082 362 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 GAD2Q05329 585 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 FOXR2Q6PJQ5 311 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 GBP6Q6ZN66 633 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 CEP68Q76N32 757 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 C12orf40Q86WS4 652 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 TMEM25Q86YD3 366 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 FAM114A1Q8IWE2 563 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 SFTPA1Q8IWL2 248 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 KIAA2013Q8IYS2 634 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 ARHGAP18Q8N392 663 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 UBR7Q8N806 425 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 GPT2Q8TD30 523 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 EZH1Q92800 747 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 KREMEN1Q96MU8 473 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 PNKPQ96T60 521 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 IER2Q9BTL4 223 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 BBS2Q9BXC9 721 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 MIS12Q9H081 205 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 ARHGEF4Q9NR80 690 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 MARCH2Q9P0N8 246 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 KIAA1257Q9ULG3 409 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 CACNA1IQ9P0X4 2223 aa9.36□□□□□ -0.91
CCDC90B-219ENST00000534753 TBC1D3BA6NDS4 549 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 K7EQS6 105 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 K7ESF4 209 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 TRIM24O15164 1050 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 PMM2O15305 246 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 THAP12O43422 761 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 KAT7O95251 611 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SETSIPP0DME0 302 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 GCNT1Q02742 428 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 MESP2Q0VG99 397 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 CNGA2Q16280 664 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 EXOC3L4Q17RC7 722 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 EMC10Q5UCC4 262 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 PMF1Q6P1K2 205 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 TRIM65Q6PJ69 517 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 LCLAT1Q6UWP7 414 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 LRRC69Q6ZNQ3 347 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 HTR3DQ70Z44 454 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 IRF2BP1Q8IU81 584 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 DENND1CQ8IV53 801 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 ZBTB44Q8NCP5 570 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 CDK5RAP1Q96SZ6 601 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 FAM129BQ96TA1 746 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 ZSWIM1Q9BR11 485 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 FAM126AQ9BYI3 521 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 THAP9Q9H5L6 903 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 FAM124BQ9H5Z6 455 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 ACP6Q9NPH0 428 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SPHK2Q9NRA0 654 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SAMSN1Q9NSI8 373 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 DNAJC17Q9NVM6 304 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 DEC1Q9P2X7 70 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SFMBT1Q9UHJ3 866 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 SMG5Q9UPR3 1016 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 INVSQ9Y283 1065 aa9.35□□□□□ -0.91
CCDC90B-219ENST00000534753 F5P12259 2224 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 YJEFN3A6XGL0 299 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 KCNJ18B7U540 433 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 E7ENQ6 273 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 MSI1O43347 362 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TSPAN3O60637 253 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TULP3O75386 442 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 STC2O76061 302 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 KLF8O95600 359 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TDGF1P13385 188 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TYRP14679 529 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 PON1P27169 355 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 GNA15P30679 374 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms