RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 IGLV3-25P01717 112 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 NCAM1P13591 858 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 CDH5P33151 784 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 NUDT1P36639 197 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 PLK1P53350 603 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SHC2P98077 582 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SULT2A1Q06520 285 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 SLC14A1Q13336 389 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 CAMK2GQ13555 558 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-217ENST00000534699 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ANO7Q6IWH7 933 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 DENND1CQ8IV53 801 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF606Q8WXB4 792 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 PILRBQ9UKJ0 227 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 ITIH6Q6UXX5 1313 aa10.82□□□□□ -0.68
CSDE1-217ENST00000534699 YJEFN3A6XGL0 299 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 E7ENQ6 273 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 SYNCRIPO60506 623 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 MOCS3O95396 460 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 APOEP02649 317 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 ADRB1P08588 477 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF883P0CG24 379 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 GNA15P30679 374 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 NAIF1Q69YI7 327 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PPP1R2P3Q6NXS1 205 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PMF1Q6P1K2 205 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 TOGARAM2Q6ZUX3 1019 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 CHPFQ8IZ52 775 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 OR2T3Q8NH03 318 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 UBA3Q8TBC4 463 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 ENOX1Q8TC92 643 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 DDI1Q8WTU0 396 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 BTN2A3PQ96KV6 586 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 TMEM9BQ9NQ34 198 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 IGHV1OR15-9A0A0B4J2B8 117 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 RNF225M0QZC1 329 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 HSF2BPO75031 334 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 LSM8O95777 96 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 SERPINF2P08697 491 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 GNSP15586 552 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 HOXD9P28356 352 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 MTIF2P46199 727 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 ARID5AQ03989 594 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 SRSF5Q13243 272 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 EIF4EBP2Q13542 120 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PIK3R6Q5UE93 754 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 EGFLAMQ63HQ2 1017 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 RBM43Q6ZSC3 357 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 TPGS1Q6ZTW0 290 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 DNASE2BQ8WZ79 361 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 SLC2A13Q96QE2 648 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 NUP58Q9BVL2 599 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 NYNRINQ9P2P1 1898 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PRRT4C9JH25 899 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 GOLGA6L22H0YM25 854 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 NDUFS2O75306 463 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 F9P00740 461 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 BRD2P25440 801 aaKnown RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 CDK17Q00537 523 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 LRMPQ12912 555 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 C5orf22Q49AR2 442 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 VWA3BQ502W6 1294 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 TTC16Q8NEE8 873 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 ELMO3Q96BJ8 720 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 PGAP3Q96FM1 320 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 MBD1Q9UIS9 605 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-217ENST00000534699 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
CSDE1-217ENST00000534699 MUC3AQ02505 3323 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 MDM4O15151 490 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PABPC1P11940 636 aaKnown RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 KRT5P13647 590 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 LCP1P13796 627 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PON1P27169 355 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 CD6P30203 668 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 YWHAZP63104 245 aaKnown RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 BRMS1LQ5PSV4 323 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 C11orf57Q6ZUT1 292 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 ZSCAN30Q86W11 494 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PGBD3Q8N328 593 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 EDEM2Q9BV94 578 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 TMEM245Q9H330 911 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 NDST4Q9H3R1 872 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PRDM16Q9HAZ2 1276 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 KIAA1522Q9P206 1035 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PLA2G4CQ9UP65 541 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PCDHGB2Q9Y5G2 931 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PCDH15Q96QU1 1955 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 THAP12O43422 761 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 DFNA5O60443 496 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 DAB1O75553 588 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms