RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 IFNA16P05015 189 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-237ENST00000534579 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
CTNND1-237ENST00000534579 SPRP35270 261 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-237ENST00000534579 PGM1P36871 562 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 BCAT1P54687 386 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 STX3Q13277 289 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 PRAMEF19Q5SWL8 479 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 SH2D3CQ8N5H7 860 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 C1QTNF7Q9BXJ2 289 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 KLHL28Q9NXS3 571 aa9.06□□□□□ -0.96
CTNND1-237ENST00000534579 AIM2O14862 343 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SOX6P35712 828 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SERPINB9P50453 376 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 EFEMP1Q12805 493 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 KIAA1324Q6UXG2 1013 aaKnown RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 IPCEF1Q8WWN9 437 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 KAT2BQ92831 832 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 KCNS3Q9BQ31 491 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 FAM167BQ9BTA0 163 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 CLPBQ9H078 707 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ADAM30Q9UKF2 790 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 CYP11B1P15538 503 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 GEMP55040 296 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SP3Q02447 781 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ARMC4Q5T2S8 1044 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 LINC00523Q86TU6 105 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SETD3Q86TU7 594 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 GALNT4Q8N4A0 578 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 EME1Q96AY2 570 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 GAS2L1Q99501 681 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 OMDQ99983 421 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 UBXN6Q9BZV1 441 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ATXN3LQ9H3M9 355 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 CISHQ9NSE2 258 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 KANSL3Q9P2N6 904 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ABCB1P08183 1280 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 BTG3Q14201 252 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 NAPEPLDQ6IQ20 393 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 MICU2Q8IYU8 434 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 LRRN4CLQ8ND94 238 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 FAM45AQ8TCE6 357 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 COPS5Q92905 334 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SERHL2Q9H4I8 314 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SMARCAL1Q9NZC9 954 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SPG21Q9NZD8 308 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ITGA11Q9UKX5 1188 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SLC9A8Q9Y2E8 581 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 TIMM13Q9Y5L4 95 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SLIT3O75094 1523 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 IFNA14P01570 189 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SP100P23497 879 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SKP1P63208 163 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 BIKQ13323 160 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 CNGA2Q16280 664 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 LLGL2Q6P1M3 1020 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 ZNF655Q8N720 491 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 TFB1MQ8WVM0 346 aaKnown RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 CLIP3Q96DZ5 547 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 FUT8Q9BYC5 575 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 SENP6Q9GZR1 1112 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-237ENST00000534579 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 PAK5Q9P286 719 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 TRPV2Q9Y5S1 764 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 PIK3C2AO00443 1686 aa9.05□□□□□ -0.96
CTNND1-237ENST00000534579 LINC00854A0A1B0GVQ3 168 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 ZBTB39O15060 712 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 ANXA9O76027 345 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 USP1O94782 785 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 RBP3P10745 1247 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 HNRNPH1P31943 449 aaKnown RBP9.04□□□□□ -0.96
CTNND1-237ENST00000534579 GNA13Q14344 377 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 TCEA2Q15560 299 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 TBC1D25Q3MII6 688 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 CCNI2Q6ZMN8 369 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-237ENST00000534579 GPR142Q7Z601 462 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 ZNF410Q86VK4 478 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 TMEM176AQ96HP8 235 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 RBM15Q96T37 977 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■□□□ 13.5
CTNND1-237ENST00000534579 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 MARCOQ9UEW3 520 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-237ENST00000534579 TFR2Q9UP52 801 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
CTNND1-237ENST00000534579 CBX4O00257 560 aa9.04□□□□□ -0.96
CTNND1-237ENST00000534579 CYP3A4P08684 503 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms