RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 PCED1AQ9H1Q7 454 aa16.62■□□□□ 0.25
RPS3-220ENST00000534555 DMAC2Q9NW81 257 aa16.62■□□□□ 0.25
RPS3-220ENST00000534555 MTMR6Q9Y217 621 aa16.62■□□□□ 0.25
RPS3-220ENST00000534555 USP3Q9Y6I4 520 aa16.62■□□□□ 0.25
RPS3-220ENST00000534555 CABIN1Q9Y6J0 2220 aa16.62■□□□□ 0.25
RPS3-220ENST00000534555 GCN1Q92616 2671 aaKnown RBP16.62■□□□□ 0.25
RPS3-220ENST00000534555 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 SPTLC2O15270 562 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 STX6O43752 255 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 TSPAN3O60637 253 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 SEMA4FO95754 770 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 ASS1P00966 412 aaKnown RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 RPN1P04843 607 aaKnown RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 GRIA4P48058 902 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 PSEN1P49768 467 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 CCT8P50990 548 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 CAMK2GQ13555 558 aaPredicted RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 CUL4BQ13620 913 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 EIF4HQ15056 248 aaKnown RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 PPP1R26Q5T8A7 1209 aaPredicted RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 SLC39A7Q92504 469 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 IGSF8Q969P0 613 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 NT5C1AQ9BXI3 368 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
RPS3-220ENST00000534555 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 CLIC5Q9NZA1 410 aa16.61■□□□□ 0.25
RPS3-220ENST00000534555 CBX4O00257 560 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 TIMM44O43615 452 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 TLX3O43711 291 aaPredicted RBP16.6■□□□□ 0.25
RPS3-220ENST00000534555 PCDHGA12O60330 932 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 CD58P19256 250 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 PIK3CAP42336 1068 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 CTSKP43235 329 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 AFMP43652 599 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 RPS14P62263 151 aaKnown RBP16.6■□□□□ 0.25
RPS3-220ENST00000534555 INCA1Q0VD86 236 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 FNDC3BQ53EP0 1204 aaKnown RBP16.6■□□□□ 0.25
RPS3-220ENST00000534555 GATAD2AQ86YP4 633 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 CPXM2Q8N436 756 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 TAF4BQ92750 862 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 ARID3AQ99856 593 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 ORAI3Q9BRQ5 295 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 DUSP16Q9BY84 665 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 BTBD1Q9H0C5 482 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 TMEM245Q9H330 911 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 OSGEPQ9NPF4 335 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 MARCH2Q9P0N8 246 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 FTSJ1Q9UET6 329 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 RAI2Q9Y5P3 530 aa16.6■□□□□ 0.25
RPS3-220ENST00000534555 POLR2DO15514 142 aaKnown RBP16.59■□□□□ 0.25
RPS3-220ENST00000534555 CD27P26842 260 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 HLA-FP30511 346 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 ZNF394Q53GI3 561 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 ADAT2Q7Z6V5 191 aaKnown RBP16.59■□□□□ 0.25
RPS3-220ENST00000534555 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 NDRG1Q92597 394 aaKnown RBP16.59■□□□□ 0.25
RPS3-220ENST00000534555 CDK5RAP1Q96SZ6 601 aaKnown RBP16.59■□□□□ 0.25
RPS3-220ENST00000534555 SLC2A11Q9BYW1 496 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
RPS3-220ENST00000534555 PRSS16Q9NQE7 514 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 BPTFQ12830 3046 aa16.59■□□□□ 0.25
RPS3-220ENST00000534555 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 PPP6R2O75170 966 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 JUPP14923 745 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 TRIM21P19474 475 aaKnown RBP16.58■□□□□ 0.24
RPS3-220ENST00000534555 HOXD9P28356 352 aaPredicted RBP16.58■□□□□ 0.24
RPS3-220ENST00000534555 STK4Q13043 487 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 DNAJC3Q13217 504 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 E2F5Q15329 346 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 CHST9Q7L1S5 443 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 RSRC2Q7L4I2 434 aaKnown RBP16.58■□□□□ 0.24
RPS3-220ENST00000534555 TMPRSS12Q86WS5 348 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 FAM217AQ8IXS0 508 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
RPS3-220ENST00000534555 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 GOLGA5Q8TBA6 731 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 PRORYQ9H606 182 aa16.58■□□□□ 0.24
RPS3-220ENST00000534555 MUC22E2RYF6 1773 aaPredicted RBP16.57■□□□□ 0.24
RPS3-220ENST00000534555 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 E9PAM4 449 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 ATXN7O15265 892 aaPredicted RBP16.57■□□□□ 0.24
RPS3-220ENST00000534555 CUTAO60888 179 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 DNTTP04053 509 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 IGHV4-34P06331 123 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 EIF2S3P41091 472 aaKnown RBP16.57■□□□□ 0.24
RPS3-220ENST00000534555 YWHAGP61981 247 aaKnown RBP eCLIP16.57■□□□□ 0.24
RPS3-220ENST00000534555 SEMG2Q02383 582 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 BECN1Q14457 450 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 MPPE1Q53F39 396 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 ADIPOR2Q86V24 386 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 TAS1R2Q8TE23 839 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 HEXIM2Q96MH2 286 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms