RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.13■■□□□ 1.61
SIPA1-210ENST00000534406 STOML2Q9UJZ1 356 aa25.13■■□□□ 1.61
SIPA1-210ENST00000534406 KANSL1LA0AUZ9 987 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 F9P00740 461 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 ABCB4P21439 1286 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 GPD1P21695 349 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 RDXP35241 583 aaKnown RBP25.12■■□□□ 1.61
SIPA1-210ENST00000534406 GAD2Q05329 585 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 MAMLD1Q13495 774 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 PPP2R5DQ14738 602 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 ADGRF1Q5T601 910 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 TMEM25Q86YD3 366 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 FLCNQ8NFG4 579 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 AZIN2Q96A70 460 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 C11orf16Q9NQ32 467 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 PIGVQ9NUD9 493 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 MARK1Q9P0L2 795 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 CALCOCO1Q9P1Z2 691 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 SLC12A6Q9UHW9 1150 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 PAXBP1Q9Y5B6 917 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 MIA3Q5JRA6 1907 aa25.12■■□□□ 1.61
SIPA1-210ENST00000534406 STK25O00506 426 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 ACSL4O60488 711 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 CD72P21854 359 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 RPL7AP62424 266 aaKnown RBP25.11■■□□□ 1.61
SIPA1-210ENST00000534406 ATP11AP98196 1134 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 MTA1Q13330 715 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 CDO1Q16878 200 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 GAB4Q2WGN9 574 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 ANO4Q32M45 955 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 CCDC14Q49A88 953 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 CWF19L1Q69YN2 538 aaKnown RBP25.11■■□□□ 1.61
SIPA1-210ENST00000534406 TXNDC11Q6PKC3 985 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 TPGS1Q6ZTW0 290 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 BMP8AQ7Z5Y6 402 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 ATP6V0D2Q8N8Y2 350 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 EXOC4Q96A65 974 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 PBXIP1Q96AQ6 731 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 CHFRQ96EP1 664 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 BTN2A3PQ96KV6 586 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 DDX50Q9BQ39 737 aaKnown RBP25.11■■□□□ 1.61
SIPA1-210ENST00000534406 BBS2Q9BXC9 721 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 FOXQ1Q9C009 403 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 MRPL47Q9HD33 250 aaKnown RBP25.11■■□□□ 1.61
SIPA1-210ENST00000534406 LTB4R2Q9NPC1 389 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 MYO1AQ9UBC5 1043 aa25.11■■□□□ 1.61
SIPA1-210ENST00000534406 KIAA1549LQ6ZVL6 1849 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 SHISA7A6NL88 538 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 NEDD8-MDP1E9PL57 170 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 GPR37L1O60883 481 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 CYBBP04839 570 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 DESP17661 470 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 CXCR3P49682 368 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 UBXN2BQ14CS0 331 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 C15orf59Q2T9L4 293 aaPredicted RBP25.1■■□□□ 1.61
SIPA1-210ENST00000534406 TMEM31Q5JXX7 168 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 BRMS1LQ5PSV4 323 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 BNIPLQ7Z465 357 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 THAP2Q9H0W7 228 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 SPTLC3Q9NUV7 552 aa25.1■■□□□ 1.61
SIPA1-210ENST00000534406 KCNU1A8MYU2 1149 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 FECHP22830 423 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 ZNF143P52747 638 aaPredicted RBP25.09■■□□□ 1.61
SIPA1-210ENST00000534406 PON2Q15165 354 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 FAM133BQ5BKY9 247 aaKnown RBP25.09■■□□□ 1.61
SIPA1-210ENST00000534406 NADSYN1Q6IA69 706 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 STRADAQ7RTN6 431 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 PJA1Q8NG27 643 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 BHMTQ93088 406 aa25.09■■□□□ 1.61
SIPA1-210ENST00000534406 XPO7Q9UIA9 1087 aaKnown RBP25.09■■□□□ 1.61
SIPA1-210ENST00000534406 NDRG2Q9UN36 371 aaKnown RBP25.09■■□□□ 1.61
SIPA1-210ENST00000534406 PRR33A8MZF0 331 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 TYRP14679 529 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 TARSP26639 723 aaKnown RBP25.08■■□□□ 1.61
SIPA1-210ENST00000534406 OPRD1P41143 372 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 EIF2DP41214 584 aaKnown RBP25.08■■□□□ 1.61
SIPA1-210ENST00000534406 GALCP54803 685 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 NAIF1Q69YI7 327 aaPredicted RBP25.08■■□□□ 1.61
SIPA1-210ENST00000534406 CHSY1Q86X52 802 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 SUGP1Q8IWZ8 645 aaKnown RBP25.08■■□□□ 1.61
SIPA1-210ENST00000534406 FBXL6Q8N531 539 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 FAM172AQ8WUF8 416 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 CD101Q93033 1021 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 NELL2Q99435 816 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 P2RY13Q9BPV8 354 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 CNPY3Q9BT09 278 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 WDCPQ9H6R7 721 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 ARHGEF38Q9NXL2 777 aa25.08■■□□□ 1.61
SIPA1-210ENST00000534406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 GFRA2O00451 464 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 TRDMT1O14717 391 aaKnown RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CCP110O43303 1012 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CACNG3O60359 315 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 ENDOD1O94919 500 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 PENKP01210 267 aaPredicted RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 CYP1A2P05177 515 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 H2AFZP0C0S5 128 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 SLC6A4P31645 630 aa25.07■■□□□ 1.6
SIPA1-210ENST00000534406 ATXN1P54253 815 aaKnown RBP25.07■■□□□ 1.6
SIPA1-210ENST00000534406 MPPE1Q53F39 396 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms