RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 LBHD1Q9BQE6 289 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-206ENST00000534320 LIASO43766 372 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 MYO1DO94832 1006 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 RBL1P28749 1068 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ABCE1P61221 599 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ST8SIA6P61647 398 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 PRUNE1Q86TP1 453 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 MAF1Q9H063 256 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ARHGAP28Q9P2N2 729 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 PHRF1Q9P1Y6 1649 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 CHRM3P20309 590 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 SCTRP47872 440 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 RGS4P49798 205 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ELAVL2Q12926 359 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 PCDHB5Q9Y5E4 795 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 PTPN1P18031 435 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 MPP3Q13368 585 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DUPD1Q68J44 220 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■■□□ 18.6
PHRF1-206ENST00000534320 ELOVL4Q9GZR5 314 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DDX20Q9UHI6 824 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 HACD1B0YJ81 288 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 RNF103O00237 685 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 DDX53Q86TM3 631 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 MTIF3Q9H2K0 278 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 FBXO44Q9H4M3 255 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 RUVBL2Q9Y230 463 aaKnown RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 VPS9D1Q9Y2B5 631 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ZNF197O14709 1029 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 MAP2K5Q13163 448 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ARHGEF7Q14155 803 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 SETD3Q86TU7 594 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-206ENST00000534320 BHMTQ93088 406 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 RBM22Q9NW64 420 aaKnown RBP eCLIP17.68■□□□□ 0.425e-8■■■■■ 27.2
PHRF1-206ENST00000534320 TRPM5Q9NZQ8 1165 aa17.68■□□□□ 0.42
PHRF1-206ENST00000534320 ZMYM2Q9UBW7 1377 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 C2orf81A6NN90 581 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 BGNP21810 368 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 PKN2Q16513 984 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 NOD2Q9HC29 1040 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 NT5MQ9NPB1 228 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 ITGB1BP2Q9UKP3 347 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 FSCN2O14926 492 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 LRG1P02750 347 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 LTFP02788 710 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 ETS1P14921 441 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 VHLP40337 213 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 CXCL17Q6UXB2 119 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 COQ7Q99807 217 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 KDM4CQ9H3R0 1056 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 MAGEB16A2A368 324 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 M0R3G1 203 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 MLH1P40692 756 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 OXCT1P55809 520 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 JAM2P57087 298 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 THEMIS2Q5TEJ8 643 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 MSL3Q8N5Y2 521 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 MAML3Q96JK9 1138 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 PRPF18Q99633 342 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 MRPS26Q9BYN8 205 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 PARVBQ9HBI1 364 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 KCNK1O00180 336 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 USP17L7P0C7H9 530 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 ICAM3P32942 547 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 PPTC7Q8NI37 304 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 CCT7Q99832 543 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 ASPSCR1Q9BZE9 553 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 TLR8Q9NR97 1041 aaKnown RBP17.67■□□□□ 0.42
PHRF1-206ENST00000534320 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 KIF17Q9P2E2 1029 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 HAO1Q9UJM8 370 aa17.67■□□□□ 0.42
PHRF1-206ENST00000534320 WDR27A2RRH5 827 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 TRPC5OSA6NMA1 111 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 PRR23D1E9PI22 279 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 H2AFYO75367 372 aaKnown RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 TRUB2O95900 331 aaKnown RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 PRR23D2P0DMB1 279 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 ARF4P18085 180 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 NOS2P35228 1153 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 POTEAQ6S8J7 498 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 ADAM2Q99965 735 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 TMEM247A6NEH6 219 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 MBL2P11226 248 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-206ENST00000534320 GRM5P41594 1212 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 TAS2R40P59535 323 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 CYB5D1Q6P9G0 228 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 MFN1Q8IWA4 741 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 ZSWIM2Q8NEG5 633 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
PHRF1-206ENST00000534320 CAMKK2Q96RR4 588 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms