RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 PCDH15Q96QU1 1955 aa20.64■□□□□ 0.89
NDUFS3-212ENST00000534208 CKAP5Q14008 2032 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 FRYQ5TBA9 3013 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 UPK3BL1B0FP48 263 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 PPP1R3GB7ZBB8 358 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 UPK3BL2E5RIL1 263 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 BMP6P22004 513 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 HOXD9P28356 352 aaPredicted RBP20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 MAPK8P45983 427 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 UBE2HP62256 183 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 ZNF252P-AS1Q0IIN9 211 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 STILQ15468 1287 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 ST3GAL2Q16842 350 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 ISM2Q6H9L7 571 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 MSANTD2Q6P1R3 559 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 KIAA1324Q6UXG2 1013 aaKnown RBP20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 PPM1KQ8N3J5 372 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 TRIML1Q8N9V2 468 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 IRGQQ8WZA9 623 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 HSPA12BQ96MM6 686 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 ZSWIM1Q9BR11 485 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 MKRN2Q9H000 416 aaKnown RBP20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 PRDM16Q9HAZ2 1276 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 CD93Q9NPY3 652 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 USP36Q9P275 1121 aaKnown RBP20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 SFMBT1Q9UHJ3 866 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 PCDHB4Q9Y5E5 795 aa20.63■□□□□ 0.89
NDUFS3-212ENST00000534208 PCNX2A6NKB5 2137 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 BICDL2A1A5D9 508 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 RNF225M0QZC1 329 aaPredicted RBP20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 NDUFS2O75306 463 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 GABBR2O75899 941 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 CD6P30203 668 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 GCNT1Q02742 428 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 MORC3Q14149 939 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 ZNF234Q14588 700 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 ADGRF1Q5T601 910 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 TMEM215Q68D42 235 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 PMF1Q6P1K2 205 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 NELFBQ8WX92 580 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 FOXJ1Q92949 421 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 IRX2Q9BZI1 471 aaPredicted RBP20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 ITM2CQ9NQX7 267 aa20.62■□□□□ 0.89
NDUFS3-212ENST00000534208 SYNCRIPO60506 623 aaKnown RBP20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 LCP1P13796 627 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 SEMA3BQ13214 749 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 SYCP2LQ5T4T6 812 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 KLHL10Q6JEL2 608 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 PIP4P1Q86T03 277 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 TMPRSS6Q8IU80 811 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 DEFB124Q8NES8 71 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 KAT5Q92993 513 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 HSFY1Q96LI6 401 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 CIPCQ9C0C6 399 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 WSB2Q9NYS7 404 aaPredicted RBP20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 SUSD2Q9UGT4 822 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 WASF3Q9UPY6 502 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 NFE2L3Q9Y4A8 694 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 ADAMTS9Q9P2N4 1935 aa20.61■□□□□ 0.89
NDUFS3-212ENST00000534208 M0QYV0 167 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 ARHGAP33O14559 1287 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 MSI1O43347 362 aaKnown RBP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 GNA14O95837 355 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 IGLV3-19P01714 112 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 IGLV3-27P01718 113 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 NCAM1P13591 858 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 PRKCHP24723 683 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 HLA-FP30511 346 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 RGS7P49802 495 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 ATXN3P54252 364 aaPredicted RBP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 MARSP56192 900 aaKnown RBP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 WDR45BQ5MNZ6 344 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 CLEC17AQ6ZS10 378 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 TRIM59Q8IWR1 403 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 EHBP1Q8NDI1 1231 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 WFIKKN2Q8TEU8 576 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 TMA16Q96EY4 203 aaKnown RBP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 TOE1Q96GM8 510 aaKnown RBP20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 SLC32A1Q9H598 525 aa20.6■□□□□ 0.89
NDUFS3-212ENST00000534208 CHD6Q8TD26 2715 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 TSPAN3O60637 253 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 KRT37O76014 449 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 FBXO21O94952 628 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 LTFP02788 710 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 SYPP08247 313 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 C7P10643 843 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 BRD2P25440 801 aaKnown RBP20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 OXTRP30559 389 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 TPMTP51580 245 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 COPAP53621 1224 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 RING1Q06587 406 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 MPP7Q5T2T1 576 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 NUGGCQ68CJ6 796 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 SERPINA13PQ6UXR4 307 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 RRAGAQ7L523 313 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 KIAA0907Q7Z7F0 614 aaPredicted RBP20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 HDDC3Q8N4P3 179 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 CADM4Q8NFZ8 388 aa20.59■□□□□ 0.89
NDUFS3-212ENST00000534208 SORCS1Q8WY21 1168 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms