RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 RPL10AP62906 217 aaKnown RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ATP11AP98196 1134 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 DPYSL2Q16555 572 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ODF2Q5BJF6 829 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 DRICH1Q6PGQ1 229 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 MFSD7Q6UXD7 560 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 MAATS1Q7Z4T9 603 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 GRASPQ7Z6J2 395 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ITIH5Q86UX2 942 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 CCDC50Q8IVM0 306 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 NUP93Q8N1F7 819 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 CCDC26Q8TAB7 109 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 TSC1Q92574 1164 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 NTAN1Q96AB6 310 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 FAF2Q96CS3 445 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 KRT12Q99456 494 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 LRRC1Q9BTT6 524 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 AP1M1Q9BXS5 423 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 PARD6BQ9BYG5 372 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 FRMD8P1Q9BZ68 369 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 DDX47Q9H0S4 455 aaKnown RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 PRDM16Q9HAZ2 1276 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 KCNK12Q9HB15 430 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 ARGLU1Q9NWB6 273 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 STIM2Q9P246 746 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 DUSP12Q9UNI6 340 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 SCML2Q9UQR0 700 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 HCN4Q9Y3Q4 1203 aa10.46□□□□□ -0.73
LDLRAD3-206ENST00000534091 NOTCH4Q99466 2003 aa10.46□□□□□ -0.74
LDLRAD3-206ENST00000534091 NUP205Q92621 2012 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 TMEM221A6NGB7 291 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 M0R296 226 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 CCL16O15467 120 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 RAD51CO43502 376 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SEC24AO95486 1093 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 F9P00740 461 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 IGLV3-25P01717 112 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 RHOP08100 348 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 GJC1P36383 396 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 PSEN1P49768 467 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ZNF135P52742 658 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ARPP19P56211 112 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SCAPQ12770 1279 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 CCNG2Q16589 344 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 CDO1Q16878 200 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SMTNL2Q2TAL5 461 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 DCAF6Q58WW2 860 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ERMARDQ5T6L9 678 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SH3PXD2AQ5TCZ1 1133 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 RNF19BQ6ZMZ0 732 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 BBS12Q6ZW61 710 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 PDZD4Q76G19 769 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ANKS1BQ7Z6G8 1248 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 MAP7D3Q8IWC1 876 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SCN4BQ8IWT1 228 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ATAD1Q8NBU5 361 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 NDRG1Q92597 394 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 FGF13Q92913 245 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 E2F7Q96AV8 911 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ASIC4Q96FT7 647 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 MYADMQ96S97 322 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 PNKPQ96T60 521 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ZNF670Q9BS34 389 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 HERPUD2Q9BSE4 406 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SNRNP25Q9BV90 132 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 DCLK3Q9C098 648 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ZWILCHQ9H900 591 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 GDF3Q9NR23 364 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ASAH2Q9NR71 780 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 SLC2A4RGQ9NR83 387 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 ABCC13Q9NSE7 274 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 RCOR3Q9P2K3 495 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 WNT16Q9UBV4 365 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 PCSK1NQ9UHG2 260 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 CDH22Q9UJ99 828 aa10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 MRPS23Q9Y3D9 190 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-206ENST00000534091 TCRBV7S2A1N4TA0A589 114 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 CAPN9O14815 690 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 ECI2O75521 394 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 SRFP11831 508 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 TFE3P19532 575 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 WEE1P30291 646 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 COILP38432 576 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 CDH6P55285 790 aa10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 YWHAGP61981 247 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDLRAD3-206ENST00000534091 TWF1Q12792 350 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms