RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SMYD4Q8IYR2 804 aaPredicted RBP17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 ZCCHC9Q8N567 271 aaKnown RBP17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 SORCS1Q8WY21 1168 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 NDRG1Q92597 394 aaKnown RBP17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 CCDC34Q96HJ3 373 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 CAMK1GQ96NX5 476 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 NUP58Q9BVL2 599 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 GOLPH3LQ9H4A5 285 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 LRRC4Q9HBW1 653 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 HESX1Q9UBX0 185 aa17.64■□□□□ 0.41
CAPRIN1-216ENST00000534042 METTL12A8MUP2 240 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 XPO1O14980 1071 aaKnown RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 EPHX1P07099 455 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 PRKCHP24723 683 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 HARS2P49590 506 aaKnown RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 BCAT1P54687 386 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 PDE4CQ08493 712 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 SGO2Q562F6 1265 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 DCAF12L1Q5VU92 463 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 RAB44Q7Z6P3 723 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 NAXDQ8IW45 347 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 RBBP8NLQ8NC74 664 aaPredicted RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 RNF139Q8WU17 664 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 TSPAN16Q9UKR8 245 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 HBS1LQ9Y450 684 aaKnown RBP17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
CAPRIN1-216ENST00000534042 AKAP13Q12802 2813 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 GOLGA4Q13439 2230 aaKnown RBP17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 FAM221BA6H8Z2 402 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 TULP2O00295 520 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 BCAT2O15382 392 aaPredicted RBP17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 TSPAN3O60637 253 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 IGLV3-19P01714 112 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 CD19P15391 556 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 COPAP53621 1224 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 ZNF445P59923 1031 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 YWHAEP62258 255 aaKnown RBP17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 BST2Q10589 180 aaKnown RBP17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 DCAF17Q5H9S7 520 aaPredicted RBP17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 TMEM215Q68D42 235 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 CACUL1Q86Y37 369 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 PKD1L2Q7Z442 2459 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 ZFYVE26Q68DK2 2539 aa17.62■□□□□ 0.41
CAPRIN1-216ENST00000534042 HLA-EP13747 358 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 HOXD9P28356 352 aaPredicted RBP17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 ADIGQ0VDE8 80 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 CUL2Q13617 745 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 CBWD6Q4V339 395 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 CBWD3Q5JTY5 395 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 CBWD5Q5RIA9 395 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 BSPRYQ5W0U4 402 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 BHLHA9Q7RTU4 235 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 FAM124AQ86V42 546 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 SIX6OS1Q8N1H7 587 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 OR2T3Q8NH03 318 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 WFIKKN2Q8TEU8 576 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 EDEM1Q92611 657 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 TMA16Q96EY4 203 aaKnown RBP17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 TSG101Q99816 390 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 SFMBT1Q9UHJ3 866 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 EIF2B4Q9UI10 523 aaKnown RBP17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 COQ4Q9Y3A0 265 aa17.61■□□□□ 0.41
CAPRIN1-216ENST00000534042 ACACAQ13085 2346 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 CER1O95813 267 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 FTH1P19P0C7X4 201 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 VDRP11473 427 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 PRCPP42785 496 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 CAMK2GQ13555 558 aaPredicted RBP17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 FNDC3BQ53EP0 1204 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 IL27RAQ6UWB1 636 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 CHST9Q7L1S5 443 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 UBA3Q8TBC4 463 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 ADAMTS14Q8WXS8 1223 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 PCED1AQ9H1Q7 454 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 LHX5Q9H2C1 402 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 GAREM1Q9H706 876 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 ABCC13Q9NSE7 274 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 RMND1Q9NWS8 449 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 PLA2G4CQ9UP65 541 aa17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 APOBEC2Q9Y235 224 aaKnown RBP17.6■□□□□ 0.41
CAPRIN1-216ENST00000534042 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 E7ENQ6 273 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 SLC16A3O15427 465 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 LATS1O95835 1130 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 ZNF883P0CG24 379 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 HLA-FP30511 346 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 MATKP42679 507 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 FKBP3Q00688 224 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 PNOCQ13519 176 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 ADGRF1Q5T601 910 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 PNPLA1Q8N8W4 532 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 SETD7Q8WTS6 366 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 CYB5D2Q8WUJ1 264 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 KCTD13Q8WZ19 329 aa17.59■□□□□ 0.41
CAPRIN1-216ENST00000534042 SNX19Q92543 992 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms