RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	BEND5	Q7L4P6	421 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	C1QL2	Q7Z5L3	287 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	RAB11FIP4	Q86YS3	637 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	HTRA1	Q92743	480 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	R3HDM4	Q96D70	268 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	MAEL	Q96JY0	434 aa	Known RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	GDF15	Q99988	308 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	DPCD	Q9BVM2	203 aa	Predicted RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	EIF2A	Q9BY44	585 aa	Known RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	LMAN2L	Q9H0V9	348 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	SH3GLB2	Q9NR46	395 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	OLA1	Q9NTK5	396 aa	Known RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	NKIRAS2	Q9NYR9	191 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	CCNL1	Q9UK58	526 aa	Predicted RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	MAN2B2	Q9Y2E5	1009 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	PTPRM	P28827	1452 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	SNAPC4	Q5SXM2	1469 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	MED1	Q15648	1581 aa	Predicted RBP	5.23	□□□□□ -1.57
ATM-223	ENST00000533979	ZNF804B	A4D1E1	1349 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	DIP2B	Q9P265	1576 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979		A0A087X0M5	115 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979		A0A1B0GX30	115 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	FSD2	A1L4K1	749 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	FAM234B	A2RU67	622 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	PODXL	O00592	558 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	TUBB4A	P04350	444 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	ANXA2	P07355	339 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	ITGA5	P08648	1049 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	NHLRC4	P0CG21	123 aa	Predicted RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	MYCL	P12524	364 aa	Predicted RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	CLNS1A	P54105	237 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	NAP1L1	P55209	391 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	RPS16	P62249	146 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	CCNI	Q14094	377 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	CCNG2	Q16589	344 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	MEA1	Q16626	185 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	LY6K	Q17RY6	165 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	ADCK5	Q3MIX3	580 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	TMEM119	Q4V9L6	283 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	DEPDC1	Q5TB30	811 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	CATSPERG	Q6ZRH7	1159 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	CAND1	Q86VP6	1230 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	FTSJ3	Q8IY81	847 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	STYX	Q8WUJ0	223 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	UCMA	Q8WVF2	138 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	SMG7	Q92540	1137 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	RILPL2	Q969X0	211 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	SNX22	Q96L94	193 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	LENG8	Q96PV6	779 aa	Predicted RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	TRIM5	Q9C035	493 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	DHX36	Q9H2U1	1008 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	SACM1L	Q9NTJ5	587 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	IRAK4	Q9NWZ3	460 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	NSMCE4A	Q9NXX6	385 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	IGSF9	Q9P2J2	1179 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	AASS	Q9UDR5	926 aa		5.22	□□□□□ -1.57
ATM-223	ENST00000533979	RGS17	Q9UGC6	210 aa	Predicted RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	SRP68	Q9UHB9	627 aa	Known RBP	5.22	□□□□□ -1.57
ATM-223	ENST00000533979	WDR91	A4D1P6	747 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	CLCA1	A8K7I4	914 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979		H7C1Q1	480 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	PPP6C	O00743	305 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	TIPRL	O75663	272 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	TNFRSF6B	O95407	300 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	KEL	P23276	732 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	ADORA2A	P29274	412 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	PRKAR1B	P31321	381 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	GALNS	P34059	522 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	KRT20	P35900	424 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	PRKAG1	P54619	331 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	CYP4F2	P78329	520 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	TRPC3	Q13507	836 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	RAB30	Q15771	203 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	EZH2	Q15910	746 aa	Known RBP	5.21	□□□□□ -1.58
ATM-223	ENST00000533979	INSC	Q1MX18	579 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	ZNF425	Q6IV72	752 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	FBXO38	Q6PIJ6	1188 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	TRIM72	Q6ZMU5	477 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	C2CD5	Q86YS7	1000 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	HERC6	Q8IVU3	1022 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	VGLL2	Q8N8G2	317 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	ANKRD52	Q8NB46	1076 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	BPIFB1	Q8TDL5	484 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	IPO4	Q8TEX9	1081 aa	Known RBP	5.21	□□□□□ -1.58
ATM-223	ENST00000533979	RAPGEF4	Q8WZA2	1011 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	MAML1	Q92585	1016 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	C17orf80	Q9BSJ5	609 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	GBA2	Q9HCG7	927 aa	Predicted RBP	5.21	□□□□□ -1.58
ATM-223	ENST00000533979	KIF17	Q9P2E2	1029 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	FEM1B	Q9UK73	627 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	GPR34	Q9UPC5	381 aa		5.21	□□□□□ -1.58
ATM-223	ENST00000533979	TRIM43B	A6NCK2	446 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	POC1B-GALNT4	F8VUJ3	575 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	THAP12	O43422	761 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	ZBED4	O75132	1171 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	FAM155B	O75949	473 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	MT-ND5	P03915	603 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	PRR35	P0CG20	571 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	MYL4	P12829	197 aa		5.2	□□□□□ -1.58
ATM-223	ENST00000533979	PAPOLA	P51003	745 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 166 ms