RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 SLC20A1Q8WUM9 679 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 DDIT4Q9NX09 232 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 PLK2Q9NYY3 685 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 SLC12A6Q9UHW9 1150 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 FBXO10Q9UK96 956 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 MMP17Q9ULZ9 603 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 R4GN57 208 aa16.46■□□□□ 0.23
TSKU-204ENST00000533752 ZFHX2Q9C0A1 2572 aaPredicted RBP16.45■□□□□ 0.22
TSKU-204ENST00000533752 GFRA2O00451 464 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 LILRB5O75023 590 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 GRAP2O75791 330 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 APBB3O95704 486 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 TPM3P06753 285 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 CCR1P32246 355 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 CNR2P34972 360 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 NOS2P35228 1153 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 MATKP42679 507 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 NSFP46459 744 aaKnown RBP16.45■□□□□ 0.22
TSKU-204ENST00000533752 MRE11P49959 708 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 FANCCQ00597 558 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 ARID5AQ03989 594 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 MESP2Q0VG99 397 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 DMC1Q14565 340 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 NR1I3Q14994 352 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 TAF5Q15542 800 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 XYLT1Q86Y38 959 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 CPA5Q8WXQ8 436 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 IQCDQ96DY2 449 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 TMA16Q96EY4 203 aaKnown RBP16.45■□□□□ 0.22
TSKU-204ENST00000533752 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 EDEM3Q9BZQ6 932 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.45■□□□□ 0.22
TSKU-204ENST00000533752 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 FANCMQ8IYD8 2048 aa16.45■□□□□ 0.22
TSKU-204ENST00000533752 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 CHRNB2P17787 502 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 MMP8P22894 467 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 HOXD9P28356 352 aaPredicted RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 TIE1P35590 1138 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 KIR2DL1P43626 348 aaPredicted RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 DGKEP52429 567 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 UBASH3AP57075 661 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 EIF4HQ15056 248 aaKnown RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 FAM133BQ5BKY9 247 aaKnown RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 FIGNQ5HY92 759 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 PPP1R2P3Q6NXS1 205 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 ARCQ7LC44 396 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 WDR5BQ86VZ2 330 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 ATP6V0D2Q8N8Y2 350 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 IL17RCQ8NAC3 791 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 HJURPQ8NCD3 748 aaPredicted RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 TSTD1Q8NFU3 115 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 BAP1Q92560 729 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
TSKU-204ENST00000533752 NUP58Q9BVL2 599 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 TSPY26PQ9H489 355 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 C2orf42Q9NWW7 574 aa16.44■□□□□ 0.22
TSKU-204ENST00000533752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSKU-204ENST00000533752 PRR23AA6NEV1 266 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 NPC1O15118 1278 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 GFRA3O60609 400 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 ALDH1A2O94788 518 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 KLF8O95600 359 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 MOCS2O96007 188 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 CISD3P0C7P0 127 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 CHRM1P11229 460 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 ABCB4P21439 1286 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 FNTBP49356 437 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 CENPCQ03188 943 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 EIF4EBP2Q13542 120 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 NFKBIBQ15653 356 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 CLEC16AQ2KHT3 1053 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 ZC3H12AQ5D1E8 599 aaKnown RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 PIK3R6Q5UE93 754 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 SND1Q7KZF4 910 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSKU-204ENST00000533752 CCDC117Q8IWD4 279 aaPredicted RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 SFTPA1Q8IWL2 248 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 ALLCQ8N6M5 410 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 WFIKKN2Q8TEU8 576 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 UCMAQ8WVF2 138 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 RNF34Q969K3 372 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
TSKU-204ENST00000533752 SEPT11Q9NVA2 429 aaKnown RBP16.43■□□□□ 0.22
TSKU-204ENST00000533752 RIF1Q5UIP0 2472 aaKnown RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 LRRC53A6NM62 1247 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 TRIM24O15164 1050 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 TSPAN3O60637 253 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 F9P00740 461 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 CALB1P05937 261 aa16.42■□□□□ 0.22
TSKU-204ENST00000533752 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 GSCP56915 257 aaPredicted RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 RNASE9P60153 205 aaKnown RBP16.42■□□□□ 0.22
TSKU-204ENST00000533752 ASIC2Q16515 512 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms