RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 GDAP1Q8TB36 358 aa29.42■■■□□ 2.3
SAMD1-202ENST00000533683 CKAP2Q8WWK9 683 aa29.42■■■□□ 2.3
SAMD1-202ENST00000533683 DDIT4Q9NX09 232 aa29.42■■■□□ 2.3
SAMD1-202ENST00000533683 SENP1Q9P0U3 644 aa29.42■■■□□ 2.3
SAMD1-202ENST00000533683 ATXN2Q99700 1313 aaKnown RBP29.41■■■□□ 2.3
SAMD1-202ENST00000533683 FAM47DPA6NHR8 397 aa29.41■■■□□ 2.3
SAMD1-202ENST00000533683 EEF2KO00418 725 aaKnown RBP29.41■■■□□ 2.3
SAMD1-202ENST00000533683 SCAPQ12770 1279 aa29.41■■■□□ 2.3
SAMD1-202ENST00000533683 MCUQ8NE86 351 aa29.41■■■□□ 2.3
SAMD1-202ENST00000533683 DMAP1Q9NPF5 467 aaPredicted RBP29.41■■■□□ 2.3
SAMD1-202ENST00000533683 TCRBV9S1A1TA0A576 114 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 SPAG7O75391 227 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 IFT88Q13099 833 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 PXYLP1Q8TE99 480 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 LINC01599Q8WXQ3 324 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 CFHR5Q9BXR6 569 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 RRN3Q9NYV6 651 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 FRMPD3Q5JV73 1810 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 SF3B1O75533 1304 aaKnown RBP eCLIP29.4■■■□□ 2.3
SAMD1-202ENST00000533683 A0A1W2PPM1 405 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 YWHAGP61981 247 aaKnown RBP eCLIP29.4■■■□□ 2.3
SAMD1-202ENST00000533683 LHX8Q68G74 356 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 GLB1LQ6UWU2 654 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 SLC24A5Q71RS6 500 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 ZNF280BQ86YH2 543 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 THEM5Q8N1Q8 247 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 DCAKDQ8WVC6 231 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 IRGQQ8WZA9 623 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 CYTH2Q99418 400 aa29.4■■■□□ 2.3
SAMD1-202ENST00000533683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.4■■■□□ 2.3
SAMD1-202ENST00000533683 EOMESO95936 686 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 SEMA3BQ13214 749 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 PAFAH1B3Q15102 231 aaKnown RBP29.39■■■□□ 2.3
SAMD1-202ENST00000533683 PIGWQ7Z7B1 504 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 C4orf33Q8N1A6 199 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 SMC6Q96SB8 1091 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 TSEN34Q9BSV6 310 aaKnown RBP29.39■■■□□ 2.3
SAMD1-202ENST00000533683 COLEC11Q9BWP8 271 aa29.39■■■□□ 2.3
SAMD1-202ENST00000533683 A0A1W2PQ45 241 aaPredicted RBP29.39■■■□□ 2.29
SAMD1-202ENST00000533683 A0A1W2PQY0 241 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 DCLK1O15075 740 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 PRPF4O43172 522 aaKnown RBP eCLIP29.39■■■□□ 2.294e-12■■■■■ 40.2
SAMD1-202ENST00000533683 DDHD2O94830 711 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 TPSB2P20231 275 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 STX2P32856 288 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 MSH2P43246 934 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 PRKD1Q15139 912 aaPredicted RBP29.39■■■□□ 2.29
SAMD1-202ENST00000533683 TPSAB1Q15661 275 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 CLLU1OSQ5K130 101 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 ANKRD20A2Q5SQ80 823 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 ANKRD20A1Q5TYW2 823 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 ANKRD20A3Q5VUR7 823 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 BSPRYQ5W0U4 402 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 CABS1Q96KC9 395 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 CREBZFQ9NS37 354 aa29.39■■■□□ 2.29
SAMD1-202ENST00000533683 A0A0A0MRY4 1105 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 TCP11X1B4DZS4 312 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 SPAG6O75602 509 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 TYMPP19971 482 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 SEMA5AQ13591 1074 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 ZNF534Q76KX8 674 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 YTHDF3Q7Z739 585 aaKnown RBP29.38■■■□□ 2.29
SAMD1-202ENST00000533683 SLC43A3Q8NBI5 491 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 SGSM3Q96HU1 749 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 SPATA13Q96N96 652 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 PTPRDP23468 1912 aa29.38■■■□□ 2.29
SAMD1-202ENST00000533683 F9P00740 461 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 MAGEA3P43357 314 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 WDR4P57081 412 aaKnown RBP29.37■■■□□ 2.29
SAMD1-202ENST00000533683 TSPY1Q01534 308 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 AP1B1Q10567 949 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 PDK1Q15118 436 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 MAPRE1Q15691 268 aaKnown RBP29.37■■■□□ 2.29
SAMD1-202ENST00000533683 DENND1AQ8TEH3 1009 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 CFAP36Q96G28 342 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 NLRC5Q86WI3 1866 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 KIAA0754O94854 1291 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 INHAP05111 366 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 KBTBD12Q3ZCT8 623 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 DENND5BQ6ZUT9 1274 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 TP53INP2Q8IXH6 220 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 SCML4Q8N228 414 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 MZB1Q8WU39 189 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 P2RY11Q96G91 374 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 PRDM12Q9H4Q4 367 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 PNPLA8Q9NP80 782 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 PCDHB8Q9UN66 801 aa29.37■■■□□ 2.29
SAMD1-202ENST00000533683 ARHGEF37A1IGU5 675 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 TRIM66O15016 1216 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 ERCC2P18074 760 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 GLUD2P49448 558 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 SLC18A1P54219 525 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 FAM189BP81408 668 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 DSC1Q08554 894 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 SCAMP5Q8TAC9 235 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 STARD7Q9NQZ5 370 aa29.36■■■□□ 2.29
SAMD1-202ENST00000533683 ZC3H7BQ9UGR2 993 aaKnown RBP29.36■■■□□ 2.29
SAMD1-202ENST00000533683 SMG5Q9UPR3 1016 aaKnown RBP29.36■■■□□ 2.29
SAMD1-202ENST00000533683 MYO18AQ92614 2054 aaKnown RBP29.36■■■□□ 2.29
SAMD1-202ENST00000533683 CXCR3P49682 368 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms