RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ELF2Q15723 593 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 SLC9C1Q4G0N8 1177 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 AWAT1Q58HT5 328 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 ZNF569Q5MCW4 686 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 ZNF425Q6IV72 752 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 C11orf87Q6NUJ2 197 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 MSANTD2Q6P1R3 559 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 RINLQ6ZS11 566 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 MRPL10Q7Z7H8 261 aaKnown RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 CELF1Q92879 486 aaKnown RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 ZNF845Q96IR2 970 aaPredicted RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 SIGLEC11Q96RL6 698 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 PRPF18Q99633 342 aaKnown RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 TRIM2Q9C040 744 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 WDR12Q9GZL7 423 aaKnown RBP3.13□□□□□ -1.91
ATM-220ENST00000533526 ERVK-5Q9HDB9 667 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 CHST12Q9NRB3 414 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 KLHL13Q9P2N7 655 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 PCDHB7Q9Y5E2 793 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 PCDHB2Q9Y5E7 798 aa3.13□□□□□ -1.91
ATM-220ENST00000533526 ABHD14A-ACY1A0A1B0GW23 586 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 MOSPD3O75425 235 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 SKAP2O75563 359 aaPredicted RBP3.12□□□□□ -1.91
ATM-220ENST00000533526 LARGE1O95461 756 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 PLAUP00749 431 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 ITGA5P08648 1049 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 CTSAP10619 480 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 ALADP13716 330 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 SFPQP23246 707 aaKnown RBP eCLIP3.12□□□□□ -1.91
ATM-220ENST00000533526 SLC8A1P32418 973 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 AGTR2P50052 363 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 ZNF84P51523 738 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 TNFAIP2Q03169 654 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 LAMB3Q13751 1172 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 EARS2Q5JPH6 523 aaKnown RBP3.12□□□□□ -1.91
ATM-220ENST00000533526 ATPAF1Q5TC12 328 aaPredicted RBP3.12□□□□□ -1.91
ATM-220ENST00000533526 RINT1Q6NUQ1 792 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 WDR93Q6P2C0 686 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 SLC2A7Q6PXP3 512 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 KYAT3Q6YP21 454 aaKnown RBP3.12□□□□□ -1.91
ATM-220ENST00000533526 C1QL2Q7Z5L3 287 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 TRABD2AQ86V40 505 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 LAS2Q8IYD9 372 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 ADPRHL1Q8NDY3 354 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 C16orf52Q8NHV5 167 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 FAM71BQ8TC56 605 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 SLC22A17Q8WUG5 538 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 ASB12Q8WXK4 309 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 PIGKQ92643 395 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 KAT2BQ92831 832 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 COQ8BQ96D53 544 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 EID2BQ96D98 161 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 VPS16Q9H269 839 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 TP63Q9H3D4 680 aaPredicted RBP3.12□□□□□ -1.91
ATM-220ENST00000533526 CDCP1Q9H5V8 836 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 EPS8L2Q9H6S3 715 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 KCNK9Q9NPC2 374 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 FSCN3Q9NQT6 498 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 IGSF9Q9P2J2 1179 aa3.12□□□□□ -1.91
ATM-220ENST00000533526 C3orf70A6NLC5 250 aaPredicted RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 EFCAB8A8MWE9 144 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 PRYO14603 147 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 PPEF2O14830 753 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TLR2O60603 784 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 CER1O95813 267 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TMEM191BP0C7N4 346 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TFEBP19484 476 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 RPS6KB1P23443 525 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 LMO1P25800 156 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 NDUFS1P28331 727 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 SERPINB3P29508 390 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 CPA2P48052 419 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 CDK7P50613 346 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 CFHR1Q03591 330 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 ICA1Q05084 483 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 ZNF91Q05481 1191 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 MTA1Q13330 715 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 GAB1Q13480 694 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 GRM4Q14833 912 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 PUM3Q15397 648 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 SEC23BQ15437 767 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TWIST1Q15672 202 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 ZACNQ401N2 412 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 C10orf25Q5T742 122 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 XRRA1Q6P2D8 792 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TMEM88Q6PEY1 159 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 C1orf228Q6PIY5 440 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 RBM44Q6ZP01 1051 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 IPO4Q8TEX9 1081 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 C18orf8Q96DM3 657 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 REXO5Q96IC2 774 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 ZNF778Q96MU6 729 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 FCRL5Q96RD9 977 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 ELOVL1Q9BW60 279 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 PRDM16Q9HAZ2 1276 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 AGO4Q9HCK5 861 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 PLCB1Q9NQ66 1216 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 ASNSD1Q9NWL6 643 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 IPO11Q9UI26 975 aaKnown RBP3.11□□□□□ -1.91
ATM-220ENST00000533526 HERC5Q9UII4 1024 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms