RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 MLNP12872 115 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 ZFXP17010 805 aaPredicted RBP17.14■□□□□ 0.33
CTSB-228ENST00000533455 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
CTSB-228ENST00000533455 NDST1P52848 882 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 PCLAFQ15004 111 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 PLPPR4Q7Z2D5 763 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 MAVSQ7Z434 540 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 SHKBP1Q8TBC3 707 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 ACTRT2Q8TDY3 377 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 KHSRPQ92945 711 aaKnown RBP eCLIP17.14■□□□□ 0.33
CTSB-228ENST00000533455 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 EBF3Q9H4W6 596 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 ASB7Q9H672 318 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 ETAA1Q9NY74 926 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 ARHGAP42A6NI28 874 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 SIN3BO75182 1162 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 ALDOAP04075 364 aaKnown RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 ZCCHC18P0CG32 403 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 MCF2P10911 925 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DPEP1P16444 411 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GRK2P25098 689 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 NR2C2P49116 596 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SLC6A3Q01959 620 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 TNFAIP2Q03169 654 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 CCNIQ14094 377 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DPYSL2Q16555 572 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 C16orf46Q6P387 395 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 PACS1Q6VY07 963 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SORT1Q99523 831 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GPR20Q99678 358 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DDX50Q9BQ39 737 aaKnown RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 XPNPEP3Q9NQH7 507 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DCDC2Q9UHG0 476 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DESP17661 470 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GRIA1P42261 906 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 IDH3AP50213 366 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 ERFP50548 548 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 HDAC4P56524 1084 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 IRX4P78413 519 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GBE1Q04446 702 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SLC10A2Q12908 348 aaPredicted RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 DYNC1I2Q13409 638 aaKnown RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 PDE1CQ14123 709 aaPredicted RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 INSCQ1MX18 579 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 PKDCCQ504Y2 493 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 RNF111Q6ZNA4 994 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 OLFM3Q96PB7 478 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SLC4A5Q9BY07 1137 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 PRMT7Q9NVM4 692 aaPredicted RBP17.13■□□□□ 0.33
CTSB-228ENST00000533455 MORF4L1Q9UBU8 362 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
CTSB-228ENST00000533455 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.331e-6■■■■■ 91.3
CTSB-228ENST00000533455 ZNF195O14628 629 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 TPP1O14773 563 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 AP1G2O75843 785 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 PROCP04070 461 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 PRKCGP05129 697 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 ADORA2AP29274 412 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 PRDX6P30041 224 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 FAM187BQ17R55 369 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 CNPY1Q3B7I2 92 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 LIN52Q52LA3 116 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 RASSF3Q86WH2 238 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 TRIM50Q86XT4 487 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 ST13P4Q8IZP2 240 aaPredicted RBP17.12■□□□□ 0.33
CTSB-228ENST00000533455 CDKL2Q92772 493 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 MMP19Q99542 508 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 SPATA16Q9BXB7 569 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 EVPLQ92817 2033 aa17.12■□□□□ 0.33
CTSB-228ENST00000533455 WDR27A2RRH5 827 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 GJB1P08034 283 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 GSTT1P30711 240 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 FDFT1P37268 417 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 PTPN9P43378 593 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 HARS2P49590 506 aaKnown RBP17.11■□□□□ 0.33
CTSB-228ENST00000533455 RGS7P49802 495 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
CTSB-228ENST00000533455 ASPHQ12797 758 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms