RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 KLF16Q9BXK1 252 aaPredicted RBP11.79□□□□□ -0.52
GMDS-210ENST00000533279 TRIM7Q9C029 511 aa11.79□□□□□ -0.52
GMDS-210ENST00000533279 PIGVQ9NUD9 493 aa11.79□□□□□ -0.52
GMDS-210ENST00000533279 AP4E1Q9UPM8 1137 aa11.79□□□□□ -0.52
GMDS-210ENST00000533279 JRKLQ9Y4A0 524 aa11.79□□□□□ -0.52
GMDS-210ENST00000533279 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
GMDS-210ENST00000533279 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 KCNU1A8MYU2 1149 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 H3BRJ5 948 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 ACSL4O60488 711 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 MOSPD3O75425 235 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 STC2O76061 302 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 FTCDO95954 541 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 LAMP2P13473 410 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 CASQ1P31415 396 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 PGFP49763 221 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 HDAC4P56524 1084 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 RWDD2BP57060 319 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 SCAPQ12770 1279 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 USP4Q13107 963 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 NR1H3Q13133 447 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 PDK2Q15119 407 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 SEL1L2Q5TEA6 688 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 CCDC50Q8IVM0 306 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 ZNF557Q8N988 423 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 USP13Q92995 863 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 EXOC4Q96A65 974 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 AZIN2Q96A70 460 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 FCRL2Q96LA5 508 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 MAK16Q9BXY0 300 aaKnown RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 RNF38Q9H0F5 515 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 SIK2Q9H0K1 926 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
GMDS-210ENST00000533279 TRPV4Q9HBA0 871 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.78□□□□□ -0.52
GMDS-210ENST00000533279 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
GMDS-210ENST00000533279 LRRD1A4D1F6 860 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 ECI2O75521 394 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
GMDS-210ENST00000533279 NFATC1O95644 943 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 ADH1CP00326 375 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 CTNNA2P26232 953 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 CTNNA1P35221 906 aaKnown RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 ADRA1BP35368 520 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 DNA2P51530 1060 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 CDH6P55285 790 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 TPI1P60174 286 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 PITX1P78337 314 aaPredicted RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 PDGFRLQ15198 375 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 FAM78AQ5JUQ0 283 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 CCDC181Q5TID7 509 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 HTR3DQ70Z44 454 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 SLC35F6Q8N357 371 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 LRRC57Q8N9N7 239 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 ATP2A3Q93084 1043 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 ELSPBP1Q96BH3 223 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 SLC39A13Q96H72 371 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 C16orf45Q96MC5 204 aaPredicted RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 MYADMQ96S97 322 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 NAPGQ99747 312 aaPredicted RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 CALN1Q9BXU9 219 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 DUS2Q9NX74 493 aaKnown RBP11.77□□□□□ -0.53
GMDS-210ENST00000533279 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 C2orf16Q68DN1 1984 aa11.77□□□□□ -0.53
GMDS-210ENST00000533279 A0A0U1RQJ8 604 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 HEPACAM2A8MVW5 462 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 CREB3O43889 395 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 PAGE1O75459 146 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 PRAMEF12O95522 483 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 TFE3P19532 575 aaPredicted RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 KCNQ1P51787 676 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 COPS2P61201 443 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 AMPD2Q01433 879 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 ZNF77Q15935 545 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 PREPLQ4J6C6 727 aaPredicted RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 ADGRF1Q5T601 910 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
GMDS-210ENST00000533279 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
GMDS-210ENST00000533279 BNIPLQ7Z465 357 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms