RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TMEM8BA6NDV4 472 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 XPO1O14980 1071 aaKnown RBP23.88■■□□□ 1.41
PKP3-210ENST00000533249 SH3BP5O60239 455 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 EPHX1P07099 455 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 RDXP35241 583 aaKnown RBP23.88■■□□□ 1.41
PKP3-210ENST00000533249 TPMTP51580 245 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 ADIGQ0VDE8 80 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 GRIK2Q13002 908 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 CUL2Q13617 745 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 TMEM215Q68D42 235 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 SERPINA13PQ6UXR4 307 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 ZCCHC9Q8N567 271 aaKnown RBP23.88■■□□□ 1.41
PKP3-210ENST00000533249 RNF139Q8WU17 664 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 EDEM1Q92611 657 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 TSG101Q99816 390 aa23.88■■□□□ 1.41
PKP3-210ENST00000533249 OLA1Q9NTK5 396 aaKnown RBP23.88■■□□□ 1.41
PKP3-210ENST00000533249 ACADMP11310 421 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 HARS2P49590 506 aaKnown RBP23.87■■□□□ 1.41
PKP3-210ENST00000533249 COPAP53621 1224 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 BST2Q10589 180 aaKnown RBP23.87■■□□□ 1.41
PKP3-210ENST00000533249 LRMPQ12912 555 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 E2F5Q15329 346 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 TRIP4Q15650 581 aaPredicted RBP23.87■■□□□ 1.41
PKP3-210ENST00000533249 MPPE1Q53F39 396 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 FAM217AQ8IXS0 508 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 CHCHD4Q8N4Q1 142 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 UBA3Q8TBC4 463 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 ZCCHC14Q8WYQ9 949 aaKnown RBP23.87■■□□□ 1.41
PKP3-210ENST00000533249 RMND1Q9NWS8 449 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 SFMBT1Q9UHJ3 866 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 COQ4Q9Y3A0 265 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 MSRB2Q9Y3D2 182 aa23.87■■□□□ 1.41
PKP3-210ENST00000533249 CKAP5Q14008 2032 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 A0A1B0GTW7 788 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 SLC16A3O15427 465 aaKnown RBP23.86■■□□□ 1.41
PKP3-210ENST00000533249 GJB3O75712 270 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 HLA-EP13747 358 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 OXTRP30559 389 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 YWHAEP62258 255 aaKnown RBP23.86■■□□□ 1.41
PKP3-210ENST00000533249 SLC14A1Q13336 389 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 HNRNPDQ14103 355 aaKnown RBP23.86■■□□□ 1.41
PKP3-210ENST00000533249 DCAF12L1Q5VU92 463 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 BSPRYQ5W0U4 402 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 SIX6OS1Q8N1H7 587 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 RBBP8NLQ8NC74 664 aaPredicted RBP23.86■■□□□ 1.41
PKP3-210ENST00000533249 CADM4Q8NFZ8 388 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 DNASE2BQ8WZ79 361 aa23.86■■□□□ 1.41
PKP3-210ENST00000533249 HBS1LQ9Y450 684 aaKnown RBP23.86■■□□□ 1.41
PKP3-210ENST00000533249 YJEFN3A6XGL0 299 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 E7ENQ6 273 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 H0Y626 953 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 TRIM16O95361 564 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 HOXD9P28356 352 aaPredicted RBP23.85■■□□□ 1.41
PKP3-210ENST00000533249 PMS1P54277 932 aaKnown RBP23.85■■□□□ 1.41
PKP3-210ENST00000533249 ANKRD40Q6AI12 368 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 FAM124AQ86V42 546 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 PCDHB9Q9Y5E1 797 aa23.85■■□□□ 1.41
PKP3-210ENST00000533249 MSI1O43347 362 aaKnown RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 TIMM44O43615 452 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 VDRP11473 427 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 LCP1P13796 627 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 FKBP3Q00688 224 aaKnown RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 TRIP6Q15654 476 aaKnown RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 FNDC3BQ53EP0 1204 aaKnown RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 ZNF658Q5TYW1 1059 aaPredicted RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 NAXDQ8IW45 347 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 CYB5D2Q8WUJ1 264 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 TMA16Q96EY4 203 aaKnown RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 NUP58Q9BVL2 599 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 ZDHHC5Q9C0B5 715 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 ARMCX3Q9UH62 379 aaPredicted RBP23.84■■□□□ 1.41
PKP3-210ENST00000533249 NFE2L3Q9Y4A8 694 aa23.84■■□□□ 1.41
PKP3-210ENST00000533249 FAM208BQ5VWN6 2430 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 TRIM49BA6NDI0 452 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 SRRM3A6NNA2 597 aaPredicted RBP23.83■■□□□ 1.41
PKP3-210ENST00000533249 METTL12A8MUP2 240 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 O00370 1275 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 SETSIPP0DME0 302 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 HLA-FP30511 346 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 ZNF423Q2M1K9 1284 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 CHST9Q7L1S5 443 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 ZC3H3Q8IXZ2 948 aaKnown RBP23.83■■□□□ 1.41
PKP3-210ENST00000533249 FMR1NBQ8N0W7 255 aaPredicted RBP23.83■■□□□ 1.41
PKP3-210ENST00000533249 ZNF366Q8N895 744 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 ERCC4Q92889 916 aaPredicted RBP23.83■■□□□ 1.41
PKP3-210ENST00000533249 ABCC13Q9NSE7 274 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 ABCB8Q9NUT2 735 aa23.83■■□□□ 1.41
PKP3-210ENST00000533249 EIF2B4Q9UI10 523 aaKnown RBP23.83■■□□□ 1.41
PKP3-210ENST00000533249 BCAT2O15382 392 aaPredicted RBP23.82■■□□□ 1.4
PKP3-210ENST00000533249 IGLV3-19P01714 112 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 RGS7P49802 495 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 ADGRF1Q5T601 910 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 UBR7Q8N806 425 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 OR2T3Q8NH03 318 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 WFIKKN2Q8TEU8 576 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 KCTD13Q8WZ19 329 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 SNX19Q92543 992 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 SLC35C1Q96A29 364 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 GBP4Q96PP9 640 aa23.82■■□□□ 1.4
PKP3-210ENST00000533249 GSDMAQ96QA5 445 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms