RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TLX3O43711 291 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 STX10O60499 249 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 HUS1O60921 280 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 PCSK1P29120 753 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 GCLMP48507 274 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 WNT7BP56706 349 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 POU5F1Q01860 360 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 INAVAQ3KP66 663 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 PCSK4Q6UW60 755 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 VSTM1Q6UX27 236 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 KIAA1324Q6UXG2 1013 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 GBP6Q6ZN66 633 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 C4orf50Q6ZRC1 276 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 DENND5BQ6ZUT9 1274 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 BRSK2Q8IWQ3 736 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 TOE1Q96GM8 510 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 HNRNPABQ99729 332 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 GABRG3Q99928 467 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 NUP58Q9BVL2 599 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 WSB2Q9NYS7 404 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 BTBD3Q9Y2F9 522 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 GOLGA4Q13439 2230 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 SCN1AP35498 2009 aa11.9□□□□□ -0.5
TRAPPC4-213ENST00000533149 MUC22E2RYF6 1773 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC4-213ENST00000533149 METTL12A8MUP2 240 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GFRA2O00451 464 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 PCDHGA12O60330 932 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 WISP1O95388 367 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 SLC9A1P19634 815 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 ANXA13P27216 316 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 OXTRP30559 389 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GTF2H1P32780 548 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 LHX1P48742 406 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GSDMDP57764 484 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 CXADRP78310 365 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 BNC1Q01954 994 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 RHDQ02161 417 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GOLGA8FQ08AF8 430 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GOLGA8DPQ0D2H9 430 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 SURF1Q15526 300 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 EXOC3L4Q17RC7 722 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 ANO4Q32M45 955 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 CBWD6Q4V339 395 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 CBWD3Q5JTY5 395 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 CBWD5Q5RIA9 395 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 EGFLAMQ63HQ2 1017 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 NT5DC4Q86YG4 428 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 MIB1Q86YT6 1006 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZNF516Q92618 1163 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 FGF11Q92914 225 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 HCN2Q9UL51 889 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 PCDHGA1Q9Y5H4 931 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 KALRNO60229 2985 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 TENM4Q6N022 2769 aa11.89□□□□□ -0.51
TRAPPC4-213ENST00000533149 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 HAX1O00165 279 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 PMM2O15305 246 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 P4HA2O15460 535 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 ABL1P00519 1130 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 OAS1P00973 400 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 MBL2P11226 248 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TNNI1P19237 187 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 PON1P27169 355 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 GRIK1P39086 918 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 AFF3P51826 1226 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 CLDN10P78369 228 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 CETN1Q12798 172 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM14Q14142 442 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 RTP5Q14D33 572 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TEAD4Q15561 434 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 DPY19L2P1Q6NXN4 242 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 NEK11Q8NG66 645 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZNF830Q96NB3 372 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 ACOX2Q99424 681 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TTLL2Q9BWV7 592 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 ITM2CQ9NQX7 267 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 IGSF5Q9NSI5 407 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms