RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SCUBE3Q8IX30 993 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 FAM217AQ8IXS0 508 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 WDTC1Q8N5D0 677 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 FAM149B1Q96BN6 582 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 PLD4Q96BZ4 506 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 XPO6Q96QU8 1125 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 CPXM1Q96SM3 734 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 DNAJC7Q99615 494 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 ARHGEF4Q9NR80 690 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 ABHD10Q9NUJ1 306 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 RASAL2Q9UJF2 1139 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 FBXO10Q9UK96 956 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 STARD13Q9Y3M8 1113 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 GVINP1Q7Z2Y8 2422 aa13.5□□□□□ -0.25
TRAPPC4-212ENST00000533058 HRO43593 1189 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 LATS1O95835 1130 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 PENKP01210 267 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 ERBB2P04626 1255 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 FNTBP49356 437 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 DMWDQ09019 674 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 MESP2Q0VG99 397 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 DMC1Q14565 340 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 ANO4Q32M45 955 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 TMEM110Q86TL2 294 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 CLEC4CQ8WTT0 213 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 PCDHB18PQ96TA0 734 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 STOML2Q9UJZ1 356 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 AGO1Q9UL18 857 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 MMP17Q9ULZ9 603 aa13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 SMG5Q9UPR3 1016 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC12A8A0AV02 714 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 GOLGA8SH3BPF8 625 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 LTFP02788 710 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 CYP1A1P04798 512 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 PLEKP08567 350 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 TYRP14679 529 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 CORO1AP31146 461 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 CDH5P33151 784 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 GSE1Q14687 1217 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 C2orf27AQ580R0 203 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 TOGARAM2Q6ZUX3 1019 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 GPR161Q8N6U8 529 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 TRIM62Q9BVG3 475 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
TRAPPC4-212ENST00000533058 TBC1D3BA6NDS4 549 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 GFRA2O00451 464 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.258e-12■■■■□ 21.2
TRAPPC4-212ENST00000533058 CAPN9O14815 690 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 APBB3O95704 486 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 CALB1P05937 261 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 CISD3P0C7P0 127 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 HNRNPH3P31942 346 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 HARS2P49590 506 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 DGKEP52429 567 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 RING1Q06587 406 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 NNTQ13423 1086 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 CRY1Q16526 586 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 HGSNATQ68CP4 663 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 LAIR1Q6GTX8 287 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 GRAMD4Q6IC98 578 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 ACAD10Q6JQN1 1059 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 PPP1R2P3Q6NXS1 205 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 TPGS1Q6ZTW0 290 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 RASSF3Q86WH2 238 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 NAT16Q8N8M0 369 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 IL17RCQ8NAC3 791 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 GAB3Q8WWW8 586 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 EDEM1Q92611 657 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 CCDC42Q96M95 316 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 IMPACTQ9P2X3 320 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 SLC27A6Q9Y2P4 619 aa13.47□□□□□ -0.25
TRAPPC4-212ENST00000533058 AXIN1O15169 862 aa13.46□□□□□ -0.25
TRAPPC4-212ENST00000533058 AKR1B10O60218 316 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms