RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PCDHGA4Q9Y5G9 962 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 ATP8B3O60423 1300 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 YJEFN3A6XGL0 299 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 E7ENQ6 273 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 APBB3O95704 486 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CKMT1AP12532 417 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 GBP2P32456 591 aaPredicted RBP1.84□□□□□ -2.12
KNL1-211ENST00000533001 TNFRSF4P43489 277 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CCT2P78371 535 aaKnown RBP1.84□□□□□ -2.12
KNL1-211ENST00000533001 AAMPQ13685 434 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 TAF5Q15542 800 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 HSF5Q4G112 596 aaPredicted RBP1.84□□□□□ -2.12
KNL1-211ENST00000533001 GPR158Q5T848 1215 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CATIPQ7Z7H3 387 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CPXM2Q8N436 756 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 PDCD7Q8N8D1 485 aaKnown RBP1.84□□□□□ -2.12
KNL1-211ENST00000533001 MAB21L3Q8N8X9 362 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 GPR156Q8NFN8 814 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 POMGNT1Q8WZA1 660 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 HS3ST6Q96QI5 342 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 UBAC1Q9BSL1 405 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CXXC4Q9H2H0 198 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 PNPLA8Q9NP80 782 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 TM7SF3Q9NS93 570 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 INTS13Q9NVM9 706 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 OGFRQ9NZT2 677 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CSAG2Q9Y5P2 127 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 ACTL7AQ9Y615 435 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 CPQQ9Y646 472 aa1.84□□□□□ -2.12
KNL1-211ENST00000533001 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 A0A1W2PQ72 361 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CALM1P0DP23 149 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CALM2P0DP24 149 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CALM3P0DP25 149 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 LSSP48449 732 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ACOT2P49753 483 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CDC42EP1Q00587 391 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 PDE4CQ08493 712 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TAF10Q12962 218 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 STK4Q13043 487 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 MPP7Q5T2T1 576 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TRMT1LQ7Z2T5 733 aaKnown RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 TMPRSS12Q86WS5 348 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ZNF227Q86WZ6 799 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SLC35F3Q8IY50 421 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TRIML1Q8N9V2 468 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SLC4A11Q8NBS3 891 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 NLRP7Q8WX94 980 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ATRIPQ8WXE1 791 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SLC7A3Q8WY07 619 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ECHDC3Q96DC8 303 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 MENTQ9BUN1 341 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TRIM34Q9BYJ4 488 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 BRD9Q9H8M2 597 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 PDE11AQ9HCR9 933 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SPDYE3A6NKU9 549 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 MDM4O15151 490 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CHMP2AO43633 222 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 DLGAP3O95886 979 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TRIM49P0CI25 452 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 TRIM49CP0CI26 452 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 RESTQ13127 1097 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 DMP1Q13316 513 aaPredicted RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 C16orf72Q14CZ0 275 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 PTPRRQ15256 657 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 INAVAQ3KP66 663 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 OVOS1Q6IE37 1185 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 B4GALNT3Q6L9W6 998 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 HAUS6Q7Z4H7 955 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 FGD2Q7Z6J4 655 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 RSPH3Q86UC2 560 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 NLRP14Q86W24 1093 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ZNF366Q8N895 744 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ENGASEQ8NFI3 743 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ELF4Q99607 663 aaPredicted RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 EPAS1Q99814 870 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SCAND2PQ9GZW5 306 aaPredicted RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 PDFQ9HBH1 243 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SIX2Q9NPC8 291 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ACP6Q9NPH0 428 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 IL17BQ9UHF5 180 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 PCDHA12Q9UN75 941 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 ANKRD6Q9Y2G4 727 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CLDN16Q9Y5I7 305 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 SLC16A4O15374 487 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 USO1O60763 962 aaKnown RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 TIAF1O95411 115 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CALCAP01258 141 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 GP1BBP13224 206 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 GPD2P43304 727 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 PRR30Q53SZ7 412 aaPredicted RBP1.83□□□□□ -2.12
KNL1-211ENST00000533001 C1orf228Q6PIY5 440 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CCDC186Q7Z3E2 898 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 C11orf96Q7Z7L8 435 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 CCDC33Q8N5R6 958 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 KDM1BQ8NB78 822 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 OR4C6Q8NH72 309 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 FLVCR1-AS1Q8TAF5 88 aa1.83□□□□□ -2.12
KNL1-211ENST00000533001 MICAL1Q8TDZ2 1067 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms