RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PTPN5P54829 565 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 GFPT1Q06210 699 aaPredicted RBP25.79■■□□□ 1.72
USP48-214ENST00000532737 CCDC122Q5T0U0 273 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 PLEKHA7Q6IQ23 1121 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 ALKBH5Q6P6C2 394 aaKnown RBP25.79■■□□□ 1.72
USP48-214ENST00000532737 TPGS1Q6ZTW0 290 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 FAM217AQ8IXS0 508 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 AZIN2Q96A70 460 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 LTB4R2Q9NPC1 389 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 PIGVQ9NUD9 493 aa25.79■■□□□ 1.72
USP48-214ENST00000532737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.79■■□□□ 1.72
USP48-214ENST00000532737 MTF2Q9Y483 593 aaPredicted RBP25.79■■□□□ 1.72
USP48-214ENST00000532737 GOLGA6L7A0A1B0GV03 622 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 HOXC11O43248 304 aaPredicted RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 ACSL4O60488 711 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 TARSP26639 723 aaKnown RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 CHKAP35790 457 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 RPL7AP62424 266 aaKnown RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 GAD2Q05329 585 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 MAMLD1Q13495 774 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 CCDC14Q49A88 953 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 ADGRF1Q5T601 910 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 NADSYN1Q6IA69 706 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 BNIPLQ7Z465 357 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 CPXM2Q8N436 756 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 ZNF653Q96CK0 615 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 PGAP3Q96FM1 320 aaPredicted RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 NHEJ1Q9H9Q4 299 aaPredicted RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 FBRSL1Q9HCM7 1045 aaKnown RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 PARVAQ9NVD7 372 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 MARK1Q9P0L2 795 aa25.78■■□□□ 1.72
USP48-214ENST00000532737 CNOT8Q9UFF9 292 aaKnown RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 XPO7Q9UIA9 1087 aaKnown RBP25.78■■□□□ 1.72
USP48-214ENST00000532737 KCNU1A8MYU2 1149 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 GFRA2O00451 464 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 TRDMT1O14717 391 aaKnown RBP25.77■■□□□ 1.72
USP48-214ENST00000532737 MOCS2O96007 188 aaPredicted RBP25.77■■□□□ 1.72
USP48-214ENST00000532737 APOEP02649 317 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 OPRD1P41143 372 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 SLC11A2P49281 568 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 CXCR3P49682 368 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 ATXN1P54253 815 aaKnown RBP25.77■■□□□ 1.72
USP48-214ENST00000532737 ATP11AP98196 1134 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 AMPD2Q01433 879 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 DEUP1Q05D60 604 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 UBXN2BQ14CS0 331 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 PON2Q15165 354 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 SLC18A3Q16572 532 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 ANO4Q32M45 955 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 ZNF687Q8N1G0 1237 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 RNF34Q969K3 372 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 TRIM11Q96F44 468 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 MCEEQ96PE7 176 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 DEF6Q9H4E7 631 aa25.77■■□□□ 1.72
USP48-214ENST00000532737 NDRG2Q9UN36 371 aaKnown RBP25.77■■□□□ 1.72
USP48-214ENST00000532737 USP34Q70CQ2 3546 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 FAM170BA6NMN3 283 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 PI15O43692 258 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 AKR1B10O60218 316 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 ENDOD1O94919 500 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 F9P00740 461 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 MYBL1P10243 752 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 SLC2A3P11169 496 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 ABCB4P21439 1286 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 GPD1P21695 349 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 AVPR2P30518 371 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 SDC4P31431 198 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 CCR1P32246 355 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 PTPN9P43378 593 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 SLC6A11P48066 632 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 GALK1P51570 392 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 PPP2R5DQ14738 602 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 C15orf59Q2T9L4 293 aaPredicted RBP25.76■■□□□ 1.71
USP48-214ENST00000532737 RAB6CQ53S08 254 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 FAM133BQ5BKY9 247 aaKnown RBP25.76■■□□□ 1.71
USP48-214ENST00000532737 SH3PXD2AQ5TCZ1 1133 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 C1orf228Q6PIY5 440 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 C12orf40Q86WS4 652 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 SPC24Q8NBT2 197 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 CCDC42Q96M95 316 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 NELL2Q99435 816 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 BBS2Q9BXC9 721 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 RAB6CQ9H0N0 254 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 MYO1AQ9UBC5 1043 aa25.76■■□□□ 1.71
USP48-214ENST00000532737 MRPS17Q9Y2R5 130 aaKnown RBP25.76■■□□□ 1.71
USP48-214ENST00000532737 NEDD8-MDP1E9PL57 170 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 TSPAN3O60637 253 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 SLC6A4P31645 630 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 ASTLQ6HA08 431 aaPredicted RBP25.75■■□□□ 1.71
USP48-214ENST00000532737 DCUN1D2Q6PH85 259 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 NAT16Q8N8M0 369 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 ATP6V0D2Q8N8Y2 350 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 PJA1Q8NG27 643 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 BHMTQ93088 406 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 PANX2Q96RD6 677 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 P2RY13Q9BPV8 354 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 THAP2Q9H0W7 228 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 ANLNQ9NQW6 1124 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 SPTLC3Q9NUV7 552 aa25.75■■□□□ 1.71
USP48-214ENST00000532737 PLK2Q9NYY3 685 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms