RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 KLC2Q9H0B6 622 aa15.71■□□□□ 0.11
SRPRA-206ENST00000532259 ABI2Q9NYB9 513 aaPredicted RBP15.71■□□□□ 0.11
SRPRA-206ENST00000532259 TCEA3O75764 348 aa15.71■□□□□ 0.1
SRPRA-206ENST00000532259 DSC1Q08554 894 aa15.71■□□□□ 0.1
SRPRA-206ENST00000532259 GPR152Q8TDT2 470 aa15.71■□□□□ 0.1
SRPRA-206ENST00000532259 TFB1MQ8WVM0 346 aaKnown RBP15.71■□□□□ 0.1
SRPRA-206ENST00000532259 RTP4Q96DX8 246 aa15.71■□□□□ 0.1
SRPRA-206ENST00000532259 TSEN34Q9BSV6 310 aaKnown RBP15.71■□□□□ 0.1
SRPRA-206ENST00000532259 KCNK1O00180 336 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 FBXO21O94952 628 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ZKSCAN8Q15776 578 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 RFX8Q6ZV50 586 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SRLQ86TD4 932 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TTC9BQ8N6N2 239 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TKTL2Q9H0I9 626 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 DMAP1Q9NPF5 467 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 LGALS13Q9UHV8 139 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ZMYND8Q9ULU4 1186 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 MAD1L1Q9Y6D9 718 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 FAM169AQ9Y6X4 670 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 NT5C1B-RDH14C9J2C7 533 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 E7ESA3 106 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 H3BRJ5 948 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TRIM66O15016 1216 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 FKTNO75072 461 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SKIP12755 728 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ZFXP17010 805 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 ARPP19P56211 112 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 CRADDP78560 199 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 FAM189BP81408 668 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TSPY1Q01534 308 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 IFT88Q13099 833 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 CAND1Q86VP6 1230 aaKnown RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 VSIG1Q86XK7 387 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SPATA2LQ8IUW3 424 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 VPS52Q8N1B4 723 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 THEM5Q8N1Q8 247 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 HTR3CQ8WXA8 447 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SCLYQ96I15 445 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 OLFM3Q96PB7 478 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 QKIQ96PU8 341 aaKnown RBP eCLIP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 PAFAH2Q99487 392 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 COLEC11Q9BWP8 271 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SIK2Q9H0K1 926 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 C12orf65Q9H3J6 166 aaKnown RBP15.7■□□□□ 0.1
SRPRA-206ENST00000532259 PRDM12Q9H4Q4 367 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 WDCPQ9H6R7 721 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 SQORQ9Y6N5 450 aa15.7■□□□□ 0.1
SRPRA-206ENST00000532259 NLRC5Q86WI3 1866 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 CHADO15335 359 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 MSI1O43347 362 aaKnown RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 PQBP1O60828 265 aaKnown RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 FAM155BO75949 473 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 EOMESO95936 686 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 SRGAP2BP0DMP2 458 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 ERCC2P18074 760 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 DRD4P21917 467 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 SLC5A3P53794 718 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 GEMIN4P57678 1058 aaKnown RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 OLIG2Q13516 323 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 PRPF39Q86UA1 669 aaKnown RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 NPWQ8N729 165 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 ZNF317Q96PQ6 595 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TRABDQ9H4I3 376 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 FBXW11Q9UKB1 542 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TCRBV9S1A1TA0A576 114 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 CFAP69A5D8W1 941 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 ZNF487B1APH4 448 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TCP11X1B4DZS4 312 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 SOAT2O75908 522 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 DGKIO75912 1065 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 SELPP16109 830 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 PHBP35232 272 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 NR2C2P49116 596 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TPI1P60174 286 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 DPYSQ14117 519 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 DDR2Q16832 855 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 KBTBD12Q3ZCT8 623 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TRABD2AQ86V40 505 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 FAM126BQ8IXS8 530 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 P2RY11Q96G91 374 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 UROC1Q96N76 676 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 DEFB118Q96PH6 123 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 FAM193BQ96PV7 902 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TEX264Q9Y6I9 313 aa15.69■□□□□ 0.1
SRPRA-206ENST00000532259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 RNF103O00237 685 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ENPP3O14638 875 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 NDC80O14777 642 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ANKRD20A2Q5SQ80 823 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms