RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CFAP52Q8N1V2 620 aa8.19□□□□□ -1.1
CTNND1-230ENST00000532245 ACTL9Q8TC94 416 aa8.19□□□□□ -1.1
CTNND1-230ENST00000532245 NDRG1Q92597 394 aaKnown RBP8.19□□□□□ -1.1
CTNND1-230ENST00000532245 VCPIP1Q96JH7 1222 aa8.19□□□□□ -1.1
CTNND1-230ENST00000532245 CARD9Q9H257 536 aa8.19□□□□□ -1.1
CTNND1-230ENST00000532245 CNOT10Q9H9A5 744 aaKnown RBP8.19□□□□□ -1.1
CTNND1-230ENST00000532245 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
CTNND1-230ENST00000532245 DIAPH2O60879 1101 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TTC4O95801 387 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CTSEP14091 401 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CLCN6P51797 869 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RABGGTBP53611 331 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MAGOHP61326 146 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CAPRIN1Q14444 709 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RBM43Q6ZSC3 357 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TRMT11Q7Z4G4 463 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 LZTR1Q8N653 840 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 LENG9Q96B70 501 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 B3GNT5Q9BYG0 378 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 XAB2Q9HCS7 855 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NWD2Q9ULI1 1742 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 XPO1O14980 1071 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CYP3A5P20815 502 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SERPINA4P29622 427 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MMP13P45452 471 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TM4SF4P48230 202 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SLC5A3P53794 718 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 UBXN2BQ14CS0 331 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 BMT2Q1RMZ1 405 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TAPT1Q6NXT6 567 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SLC39A5Q6ZMH5 540 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 ACAD11Q709F0 780 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CXorf40AQ8TE69 158 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 PTPN18Q99952 460 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TAS2R14Q9NYV8 317 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 ADGRA2Q96PE1 1338 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NCF1BA6NI72 391 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NCF1CA8MVU1 366 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MEI4A8MW99 385 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TXNDC9O14530 226 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 BAG2O95816 211 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 APODP05090 189 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CYP2A6P11509 494 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NCF1P14598 390 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RFC2P35250 354 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RFC1P35251 1148 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MAGEA4P43358 317 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SEC13P55735 322 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 LRRC14Q15048 493 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 LONRF1Q17RB8 773 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 ARMC12Q5T9G4 340 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MARK2Q7KZI7 788 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NCLNQ969V3 563 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 RAB3IPQ96QF0 476 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 KLF6Q99612 283 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 VCXQ9H320 206 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 DPEP3Q9H4B8 488 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 NSMCE4AQ9NXX6 385 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SHOC2Q9UQ13 582 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CACNA1FO60840 1977 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 PFKMP08237 780 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SNRPD1P62314 119 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 POLR2LP62875 67 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CYP4F8P98187 520 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TBCCQ15814 346 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 KYNUQ16719 465 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SLC10A6Q3KNW5 377 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SETMARQ53H47 684 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MROH9Q5TGP6 573 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 ZYG11BQ9C0D3 744 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 DEC1Q9P2X7 70 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 C1QTNF3-AMACRE9PGA6 284 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 IFRD1O00458 451 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 STAT4Q14765 748 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 UGT3A1Q6NUS8 523 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TTC7BQ86TV6 843 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 ARL14EPQ8N8R7 260 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 CCDC197Q8NCU1 140 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SEMA4DQ92854 862 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MS4A4AQ96JQ5 239 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 PNKPQ96T60 521 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 C1QTNF7Q9BXJ2 289 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 PITPNM3Q9BZ71 974 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 MINDY3Q9H8M7 445 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 IARS2Q9NSE4 1012 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 DUS2Q9NX74 493 aaKnown RBP8.18□□□□□ -1.1
CTNND1-230ENST00000532245 WWOXQ9NZC7 414 aa8.18□□□□□ -1.1
CTNND1-230ENST00000532245 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 ZNF513Q8N8E2 541 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-230ENST00000532245 SDCCAG3Q96C92 435 aa8.17□□□□□ -1.1
CTNND1-230ENST00000532245 AHCYL2Q96HN2 611 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms