RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 SYT11Q9BT88 431 aa11.26□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC2A11Q9BYW1 496 aa11.26□□□□□ -0.61
GPATCH4-216ENST00000531900 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
GPATCH4-216ENST00000531900 SPTBN4Q9H254 2564 aa11.26□□□□□ -0.61
GPATCH4-216ENST00000531900 CAPN9O14815 690 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 IRAK2O43187 625 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 RNF40O75150 1001 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 TRUB2O95900 331 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 APODP05090 189 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 MMEP08473 750 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 FERP16591 822 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 SDHBP21912 280 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 NOS2P35228 1153 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 KIR2DL1P43626 348 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 TBX4P57082 545 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 FANCCQ00597 558 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 CENPCQ03188 943 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 MESP2Q0VG99 397 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 MTA1Q13330 715 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 TAF5Q15542 800 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 ANO4Q32M45 955 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 LRSAM1Q6UWE0 723 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 NUDT18Q6ZVK8 323 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 CACNA2D4Q7Z3S7 1137 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 BNIPLQ7Z465 357 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 LONP2Q86WA8 852 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 DEFB106AQ8N104 65 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 CAMKK1Q8N5S9 505 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 TERB1Q8NA31 727 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 MSANTD4Q8NCY6 345 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 USP33Q8TEY7 942 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 IQCDQ96DY2 449 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 PGAP3Q96FM1 320 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 NUP58Q9BVL2 599 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 BBS2Q9BXC9 721 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 PDCL3Q9H2J4 239 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 AIPL1Q9NZN9 384 aa11.25□□□□□ -0.61
GPATCH4-216ENST00000531900 A0A1W2PQJ5 194 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 KCNU1A8MYU2 1149 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 NEDD8-MDP1E9PL57 170 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 GOLGA6L19H0YKK7 550 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 MSI1O43347 362 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 ACSL4O60488 711 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 DAB1O75553 588 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SERPINC1P01008 464 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 HMBSP08397 361 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC2A3P11169 496 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PRKCIP41743 596 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 MATKP42679 507 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC11A2P49281 568 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 FNTBP49356 437 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 CDK17Q00537 523 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PTP4A2Q12974 167 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SIM2Q14190 667 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PUM1Q14671 1186 aaKnown RBP eCLIP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 FAM133BQ5BKY9 247 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 TAF3Q5VWG9 929 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 LAIR1Q6GTX8 287 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PKN3Q6P5Z2 889 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PRR23BQ6ZRT6 265 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 KIAA0907Q7Z7F0 614 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 TAC4Q86UU9 113 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PHF13Q86YI8 300 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 OLIG1Q8TAK6 271 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC20A1Q8WUM9 679 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 ACDQ96AP0 544 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 NPY6RQ99463 290 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 C2orf42Q9NWW7 574 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 TMEM59LQ9UK28 342 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC8A2Q9UPR5 921 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 LAMA1P25391 3075 aa11.24□□□□□ -0.61
GPATCH4-216ENST00000531900 EML5Q05BV3 1969 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 PRR5-ARHGAP8B1AHC4 643 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 NPC1O15118 1278 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 ENDOD1O94919 500 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 CYBBP04839 570 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 HNRNPLP14866 589 aaKnown RBP eCLIP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 HOXD9P28356 352 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 GBP1P32455 592 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 DGKGP49619 791 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 UBASH3AP57075 661 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 ARHGAP8P85298 464 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 LMNB2Q03252 620 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 CLEC16AQ2KHT3 1053 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 PIK3R6Q5UE93 754 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 HEATR6Q6AI08 1181 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 GRAMD4Q6IC98 578 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 PPP1R2P3Q6NXS1 205 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms