RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ENTPD3O75355 529 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 B3GALNT1O75752 331 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SASH1O94885 1247 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 AGFG2O95081 481 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TMIGD3P0DMS9 266 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MYBL1P10243 752 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CHN1P15882 459 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PRKAR1BP31321 381 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 IL13P35225 146 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 BUD31P41223 144 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PXNP49023 591 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 KCNQ1P51787 676 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PPP5CP53041 499 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ITGA1P56199 1179 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 YBX1P67809 324 aaKnown RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TIAL1Q01085 375 aaKnown RBP eCLIP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 YWHAHQ04917 246 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MRPL49Q13405 166 aaKnown RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CCNIQ14094 377 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ACOX1Q15067 660 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PTPN14Q15678 1187 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 C15orf59Q2T9L4 293 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC23A3Q6PIS1 610 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MTHFD1LQ6UB35 978 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 RRM2BQ7LG56 351 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 KCTD20Q7Z5Y7 419 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 LDHDQ86WU2 507 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CCDC170Q8IYT3 715 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CMTM4Q8IZR5 234 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 OR4N4Q8N0Y3 316 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 C10orf53Q8N6V4 93 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 POU5F2Q8N7G0 328 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 POC5Q8NA72 575 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC17A8Q8NDX2 589 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TMIEQ8NEW7 156 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 LINS1Q8NG48 757 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 OR5M3Q8NGP4 307 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 GPR150Q8NGU9 434 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MOSPD2Q8NHP6 518 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SH3RF3Q8TEJ3 882 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ZFPM2Q8WW38 1151 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MYLIPQ8WY64 445 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 PPP2R3CQ969Q6 453 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 RMDN1Q96DB5 314 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ELP4Q96EB1 424 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 KIF1BPQ96EK5 621 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CEP95Q96GE4 821 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FAR2Q96K12 515 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 KLHL32Q96NJ5 620 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SLC46A1Q96NT5 459 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FNBP1Q96RU3 617 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 FIZ1Q96SL8 496 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SMOQ99835 787 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 OR10A2Q9H208 303 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 NDST4Q9H3R1 872 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 GSTO2Q9H4Y5 243 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CXorf56Q9H5V9 222 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 NRDE2Q9H7Z3 1164 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TRIM36Q9NQ86 728 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SPATS2LQ9NUQ6 558 aaKnown RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TBCCD1Q9NVR7 557 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 SELENONQ9NZV5 590 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ZNF70Q9UC06 446 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 MOSPD1Q9UJG1 213 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 CDC42EP3Q9UKI2 254 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 TBC1D30Q9Y2I9 924 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ATP6V0A2Q9Y487 856 aa4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 ZNF644Q9H582 1327 aaPredicted RBP4.63□□□□□ -1.67
AC055878.1-201ENST00000531858 LOC100509620A0A075B734 347 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 FRMD3A2A2Y4 597 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 A8MZ25 164 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 E7ENX8 843 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 E9PLN8 166 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 DDX39AO00148 427 aaKnown RBP4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 RTCAO00442 366 aaKnown RBP4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 DCLK1O15075 740 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 MUSKO15146 869 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 TGFB1I1O43294 461 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 CTIFO43310 598 aaKnown RBP4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 FMO6PO60774 539 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 PDE8BO95263 885 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 GGPS1O95749 300 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 IGHDP01880 384 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 CYP3A4P08684 503 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 CD19P15391 556 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 LAG3P18627 525 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 SCP2P22307 547 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 EPHA3P29320 983 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 PPIFP30405 207 aaKnown RBP4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 CASRP41180 1078 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 GSTM5P46439 218 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 MRE11P49959 708 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 PGDP52209 483 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 DGKQP52824 942 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 PRKAG1P54619 331 aa4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 RRP1P56182 461 aaKnown RBP4.62□□□□□ -1.67
AC055878.1-201ENST00000531858 UFM1P61960 85 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms