RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 BMP6P22004 513 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 HOXD9P28356 352 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 ZNF445P59923 1031 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 CETN1Q12798 172 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 ZNF234Q14588 700 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 STILQ15468 1287 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 MSANTD2Q6P1R3 559 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 NELFBQ8WX92 580 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 IRGQQ8WZA9 623 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 KAT5Q92993 513 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 ZSWIM1Q9BR11 485 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 CIPCQ9C0C6 399 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 MKRN2Q9H000 416 aaKnown RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 FSCN3Q9NQT6 498 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 ITM2CQ9NQX7 267 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 USP36Q9P275 1121 aaKnown RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 M0QYV0 167 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 MSI1O43347 362 aaKnown RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 TIMM44O43615 452 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 SYNCRIPO60506 623 aaKnown RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 TSPAN3O60637 253 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 BRD2P25440 801 aaKnown RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 CD6P30203 668 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 RGS7P49802 495 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 ATXN3P54252 364 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 MORC3Q14149 939 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 SYCP2LQ5T4T6 812 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 ADGRF1Q5T601 910 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 TMEM215Q68D42 235 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 DEFB124Q8NES8 71 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 SORCS1Q8WY21 1168 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 FOXJ1Q92949 421 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 GTPBP2Q9BX10 602 aaKnown RBP17.55■□□□□ 0.4
CPSF1-207ENST00000531727 CTNND2Q9UQB3 1225 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 CKAP5Q14008 2032 aa17.55■□□□□ 0.4
CPSF1-207ENST00000531727 PI4KAP42356 2102 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 MUC22E2RYF6 1773 aaPredicted RBP17.54■□□□□ 0.4
CPSF1-207ENST00000531727 ACACBO00763 2458 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 PIK3R2O00459 728 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 KRT37O76014 449 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 NCAM1P13591 858 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 PRKCHP24723 683 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 GCNT1Q02742 428 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 SEMA3BQ13214 749 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 SERPINA13PQ6UXR4 307 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 RRAGAQ7L523 313 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 TMPRSS6Q8IU80 811 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 ARHGEF19Q8IW93 802 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 RGL4Q8IZJ4 473 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 HDDC3Q8N4P3 179 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 TMA16Q96EY4 203 aaKnown RBP17.54■□□□□ 0.4
CPSF1-207ENST00000531727 SIPA1Q96FS4 1042 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 SLC32A1Q9H598 525 aa17.54■□□□□ 0.4
CPSF1-207ENST00000531727 WSB2Q9NYS7 404 aaPredicted RBP17.54■□□□□ 0.4
CPSF1-207ENST00000531727 BIN1O00499 593 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 ARHGAP33O14559 1287 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 FBXO21O94952 628 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 GNA14O95837 355 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 CALCAP01258 141 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 LTFP02788 710 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 EPHX1P07099 455 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 HLA-FP30511 346 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 COPAP53621 1224 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 MARSP56192 900 aaKnown RBP17.53■□□□□ 0.4
CPSF1-207ENST00000531727 ARID5AQ03989 594 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 KCNH2Q12809 1159 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 FOXC1Q12948 553 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 WDR45BQ5MNZ6 344 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 PIP4P1Q86T03 277 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 TRIM59Q8IWR1 403 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 WFIKKN2Q8TEU8 576 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 CLEC4CQ8WTT0 213 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 PRCCQ92733 491 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-207ENST00000531727 TOE1Q96GM8 510 aaKnown RBP17.53■□□□□ 0.4
CPSF1-207ENST00000531727 HSFY1Q96LI6 401 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 IRX2Q9BZI1 471 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-207ENST00000531727 SUSD2Q9UGT4 822 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 WASF3Q9UPY6 502 aa17.53■□□□□ 0.4
CPSF1-207ENST00000531727 KCNJ18B7U540 433 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 OPHN1O60890 802 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 GADD45BO75293 160 aaPredicted RBP17.52■□□□□ 0.4
CPSF1-207ENST00000531727 IGLV3-19P01714 112 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 AFPP02771 609 aaKnown RBP17.52■□□□□ 0.4
CPSF1-207ENST00000531727 SYPP08247 313 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 OXTRP30559 389 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 TPMTP51580 245 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 SGSHP51688 502 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 STX17P56962 302 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 RING1Q06587 406 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 PLEKHG6Q3KR16 790 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 NUGGCQ68CJ6 796 aa17.52■□□□□ 0.4
CPSF1-207ENST00000531727 KIAA0907Q7Z7F0 614 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms