RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 GPR17Q13304 367 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 CPSF6Q16630 551 aaKnown RBP eCLIP7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 CCDC142Q17RM4 750 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 SOWAHAQ2M3V2 549 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 NAIF1Q69YI7 327 aaPredicted RBP7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ANKRD40Q6AI12 368 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 IQCEQ6IPM2 695 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 RTL10Q7L3V2 364 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 CACNA2D4Q7Z3S7 1137 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 USP37Q86T82 979 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ARID3BQ8IVW6 561 aaPredicted RBP7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 YAF2Q8IY57 180 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 GUF1Q8N442 669 aaKnown RBP7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 PDCL2Q8N4E4 241 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 TMEM174Q8WUU8 243 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 DEPDC1BQ8WUY9 529 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 GAB3Q8WWW8 586 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 HPDLQ96IR7 371 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ANKRD36BP1Q96IX9 119 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZNF512Q96ME7 567 aaPredicted RBP7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 GSDMAQ96QA5 445 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 FNBP1Q96RU3 617 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 TRPV4Q9HBA0 871 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ASAH2Q9NR71 780 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 TMLHEQ9NVH6 421 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 ITGA11Q9UKX5 1188 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 L1RE1Q9UN81 338 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 SNX9Q9Y5X1 595 aa7.46□□□□□ -1.21
TRIM53CP-201ENST00000531490 MYH10P35580 1976 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 BIN1O00499 593 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CHADO15335 359 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 FOXD2O60548 495 aaPredicted RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ATP2C2O75185 946 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 VNN1O95497 513 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 PRAMEF12O95522 483 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 TNNC2P02585 160 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 C4BPAP04003 597 aaKnown RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CCDC192P0DO97 292 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ODC1P11926 461 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 FOSL1P15407 271 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 HOXA6P31267 233 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 EPHA5P54756 1037 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 MYL6P60660 151 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CREB5Q02930 508 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 BFSP1Q12934 665 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ADAM9Q13443 819 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 SURF1Q15526 300 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CAMK4Q16566 473 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 SV2CQ496J9 727 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 PLK5Q496M5 336 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 SLC39A12Q504Y0 691 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZCWPW2Q504Y3 356 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZNF658Q5TYW1 1059 aaPredicted RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 TPGS2Q68CL5 300 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CENPPQ6IPU0 288 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZNF280DQ6N043 979 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 LRSAM1Q6UWE0 723 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 LIMS2Q7Z4I7 341 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 OSTM1Q86WC4 334 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 DTX1Q86Y01 620 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 WDR49Q8IV35 697 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 SMARCE1Q969G3 411 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CCDC47Q96A33 483 aaKnown RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CGRRF1Q99675 332 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 EDEM2Q9BV94 578 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 SCNM1Q9BWG6 230 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 LRRC3Q9BY71 257 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 C8orf33Q9H7E9 229 aaPredicted RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 GDAP2Q9NXN4 497 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 CGNQ9P2M7 1197 aaKnown RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 AFF4Q9UHB7 1163 aaKnown RBP7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAN1B1Q9UKM7 699 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 YIPF1Q9Y548 306 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 NME7Q9Y5B8 376 aa7.46□□□□□ -1.22
TRIM53CP-201ENST00000531490 DENND4CQ5VZ89 1909 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 MAST4O15021 2626 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 BPTFQ12830 3046 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 ZNF638Q14966 1978 aaKnown RBP7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 MTMR11A4FU01 709 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 TRIM49BA6NDI0 452 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 OTOL1A6NHN0 477 aaPredicted RBP7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 OR6C75A6NL08 312 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 GABRDO14764 452 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 CALUO43852 315 aaPredicted RBP7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 HUS1O60921 280 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 PDGFRBP09619 1106 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 PTMSP20962 102 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 NR2F2P24468 414 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 PNPLA4P41247 253 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 CDH8P55286 799 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 PPP3CAQ08209 521 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 FCHO2Q0JRZ9 810 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 MYBPC2Q14324 1141 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 LRRC14Q15048 493 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 WDR72Q3MJ13 1102 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 DGKKQ5KSL6 1271 aa7.45□□□□□ -1.22
TRIM53CP-201ENST00000531490 TDRD10Q5VZ19 366 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms