RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ARHGAP17Q68EM7 881 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 BHLHA9Q7RTU4 235 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 ARHGAP18Q8N392 663 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 CPXM2Q8N436 756 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 PNPLA1Q8N8W4 532 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 ANKRD52Q8NB46 1076 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 DNASE2BQ8WZ79 361 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 PRCCQ92733 491 aaPredicted RBP19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 UBXN6Q9BZV1 441 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 PCDHB9Q9Y5E1 797 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 A0A1B0GTW7 788 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 TSPAN3O60637 253 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 ZBED1O96006 694 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 EPHX1P07099 455 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 HLA-EP13747 358 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 HOXB3P14651 431 aaPredicted RBP19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 RDXP35241 583 aaKnown RBP19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 SERPINA13PQ6UXR4 307 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 FAM124AQ86V42 546 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 FMNL3Q8IVF7 1028 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 FAM217AQ8IXS0 508 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 PLD4Q96BZ4 506 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 IL21RQ9HBE5 538 aa19.27■□□□□ 0.68
SSSCA1-206ENST00000531405 LOC400499M0QZD8 3231 aa19.27■□□□□ 0.67
SSSCA1-206ENST00000531405 FTH1P19P0C7X4 201 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 HOXD9P28356 352 aaPredicted RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 ZNF132P52740 706 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 MCCD1P59942 119 aaPredicted RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 PDE4CQ08493 712 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 HNRNPDQ14103 355 aaKnown RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 EIF4HQ15056 248 aaKnown RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 TRIP4Q15650 581 aaPredicted RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 EDRF1Q3B7T1 1238 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 CBWD6Q4V339 395 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 CBWD3Q5JTY5 395 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 CBWD5Q5RIA9 395 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 PM20D1Q6GTS8 502 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 TTC39CQ8N584 583 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 ZNF366Q8N895 744 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 CADM4Q8NFZ8 388 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 EDEM1Q92611 657 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 SFMBT1Q9UHJ3 866 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 EIF2B4Q9UI10 523 aaKnown RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 TSPAN16Q9UKR8 245 aa19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 GOLGA4Q13439 2230 aaKnown RBP19.26■□□□□ 0.67
SSSCA1-206ENST00000531405 ACACAQ13085 2346 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 FAM221BA6H8Z2 402 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 METTL12A8MUP2 240 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 TAF4O00268 1085 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 EPB41P11171 864 aaKnown RBP19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 ACADMP11310 421 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 OXTRP30559 389 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 SLC8A3P57103 927 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 BNC1Q01954 994 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 ARID5AQ03989 594 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 ADIGQ0VDE8 80 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 DCAF17Q5H9S7 520 aaPredicted RBP19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 TCERG1LQ5VWI1 586 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 CYB5D2Q8WUJ1 264 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 FAXDC2Q96IV6 333 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 NUP58Q9BVL2 599 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 SLC2A11Q9BYW1 496 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 ZDHHC5Q9C0B5 715 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 NFE2L3Q9Y4A8 694 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 SLCO1B1Q9Y6L6 691 aa19.25■□□□□ 0.67
SSSCA1-206ENST00000531405 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 CETN3O15182 167 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 BCAT2O15382 392 aaPredicted RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 MSI1O43347 362 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 STX10O60499 249 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 ZNF202O95125 648 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 IGLV3-19P01714 112 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 HLA-FP30511 346 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 HARS2P49590 506 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 BCAT1P54687 386 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 RING1Q06587 406 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 FNDC3BQ53EP0 1204 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 MPPE1Q53F39 396 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 SETD7Q8WTS6 366 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 ADAMTS14Q8WXS8 1223 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 SNX19Q92543 992 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 GAREM1Q9H706 876 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 LRRC4Q9HBW1 653 aa19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 FNDC3AQ9Y2H6 1198 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-206ENST00000531405 A0A1W2PQ27 194 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 A0A1W2PQ64 194 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 YJEFN3A6XGL0 299 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 E7ENQ6 273 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 CBFA2T3O75081 653 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 CAPNS1P04632 268 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 CD19P15391 556 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 SGSHP51688 502 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 BST2Q10589 180 aaKnown RBP19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 PNOCQ13519 176 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 CUL2Q13617 745 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 BSPRYQ5W0U4 402 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 SLCO6A1Q86UG4 719 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 OR2T3Q8NH03 318 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms