RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 PRSS55Q6UWB4 352 aaPredicted RBP11.3□□□□□ -0.6
SRPRA-205ENST00000531104 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 RFX8Q6ZV50 586 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 BZW1Q7L1Q6 419 aaKnown RBP11.3□□□□□ -0.6
SRPRA-205ENST00000531104 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
SRPRA-205ENST00000531104 FAM72BQ86X60 149 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 OR2W6PQ8NHA6 318 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 TTLL2Q9BWV7 592 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 CDC42EP4Q9H3Q1 356 aaKnown RBP11.3□□□□□ -0.6
SRPRA-205ENST00000531104 WDCPQ9H6R7 721 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 PAK5Q9P286 719 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
SRPRA-205ENST00000531104 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 GREB1Q4ZG55 1949 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SYNJ2BP-COX16A0A087WUM0 186 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 C5orf60A6NFR6 353 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 E7ESA3 106 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ALOX15BO15296 676 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ADAM12O43184 909 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 MFSD11O43934 449 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 GCATO75600 419 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 TTC4O95801 387 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 IFNB1P01574 187 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SOD2P04179 222 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SHBGP04278 402 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 YWHAQP27348 245 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 HTR7P34969 479 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 DSG1Q02413 1049 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 KCNJ11Q14654 390 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 PRKD1Q15139 912 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 CEP85LQ5SZL2 805 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 MANEALQ5VSG8 457 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SDHAF4Q5VUM1 108 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ANKRD22Q5VYY1 191 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 GPR65Q8IYL9 337 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ZNF276Q8N554 614 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 CASP10Q92851 521 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 PWWP2AQ96N64 755 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 TKTL2Q9H0I9 626 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 CLIC5Q9NZA1 410 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 NINJ2Q9NZG7 142 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 COX16Q9P0S2 106 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 GMIPQ9P107 970 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 ZMYND8Q9ULU4 1186 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-205ENST00000531104 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
SRPRA-205ENST00000531104 CENPFP49454 3210 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 CHADO15335 359 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 KCNN4O15554 427 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 TCEA3O75764 348 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ABLIM3O94929 683 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ABHD2P08910 425 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 CPB1P15086 417 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 VAV1P15498 845 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ERCC2P18074 760 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 LAG3P18627 525 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 GLUD2P49448 558 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 PSEN1P49768 467 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 NRLP54845 237 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 PSMD5Q16401 504 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 DENND5BQ6ZUT9 1274 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 DDX53Q86TM3 631 aaKnown RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ZBTB9Q96C00 473 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 KLC2Q9H0B6 622 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 VPS18Q9P253 973 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 MRPL42Q9Y6G3 142 aaKnown RBP11.28□□□□□ -0.6
SRPRA-205ENST00000531104 PTPRSQ13332 1948 aa11.28□□□□□ -0.6
SRPRA-205ENST00000531104 DNAH12Q6ZR08 3092 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms