RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ABRAQ8N0Z2 381 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 TMEM171Q8WVE6 324 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 XAGE5Q8WWM1 108 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 NMD3Q96D46 503 aaKnown RBP8.24□□□□□ -1.09
CSDE1-213ENST00000530784 APIPQ96GX9 242 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 DUSP22Q9NRW4 184 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 ADARB2Q9NS39 739 aaKnown RBP8.24□□□□□ -1.09
CSDE1-213ENST00000530784 AFF4Q9UHB7 1163 aaKnown RBP8.24□□□□□ -1.09
CSDE1-213ENST00000530784 TRMT112Q9UI30 125 aaKnown RBP8.24□□□□□ -1.09
CSDE1-213ENST00000530784 SNX14Q9Y5W7 946 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 THSD7BQ9C0I4 1608 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 CDHR2Q9BYE9 1310 aa8.24□□□□□ -1.09
CSDE1-213ENST00000530784 ANKRD36CQ5JPF3 1778 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 PYCARD-AS1I3L0S3 204 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 QSOX1O00391 747 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GOLIM4O00461 696 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 ZNF213O14771 459 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 ENGP17813 658 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GMPSP49915 693 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 EEFSECP57772 596 aaKnown RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 CXCL9Q07325 125 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GRM1Q13255 1194 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GRAPQ13588 217 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 POLD3Q15054 466 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 AARS2Q5JTZ9 985 aaKnown RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 FCRLBQ6BAA4 426 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GRAPLQ8TC17 118 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 CAPNS2Q96L46 248 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 LRRC27Q9C0I9 530 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 GBA2Q9HCG7 927 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 SERGEFQ9UGK8 458 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 LAS1LQ9Y4W2 734 aaKnown RBP8.23□□□□□ -1.09
CSDE1-213ENST00000530784 PAXBP1Q9Y5B6 917 aa8.23□□□□□ -1.09
CSDE1-213ENST00000530784 MANSC4A6NHS7 340 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-213ENST00000530784 TARM1B6A8C7 271 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 CHL1O00533 1208 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 VNN1O95497 513 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 MAP4K4O95819 1239 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-213ENST00000530784 PEX2P28328 305 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 FAM193AP78312 1265 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 TNIP1Q15025 636 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 WDR43Q15061 677 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSDE1-213ENST00000530784 KRT24Q2M2I5 525 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 PCID2Q5JVF3 399 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 CEP85Q6P2H3 762 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 PARS2Q7L3T8 475 aaKnown RBP8.22□□□□□ -1.09
CSDE1-213ENST00000530784 IZUMO1Q8IYV9 350 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 SOCS4Q8WXH5 440 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 SPSB4Q96A44 273 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 VOPP1Q96AW1 172 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 XPNPEP3Q9NQH7 507 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 TRMT13Q9NUP7 481 aaKnown RBP8.22□□□□□ -1.09
CSDE1-213ENST00000530784 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 OGDHLQ9ULD0 1010 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 DUOX1Q9NRD9 1551 aa8.22□□□□□ -1.09
CSDE1-213ENST00000530784 LRRC37AA6NMS7 1700 aa8.21□□□□□ -1.09
CSDE1-213ENST00000530784 LAMB2P55268 1798 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 MBD3L4A6NDZ8 208 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-213ENST00000530784 MBD3L3A6NE82 208 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-213ENST00000530784 HOXB7P09629 217 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 RHCEP18577 417 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 RPS16P62249 146 aaKnown RBP8.21□□□□□ -1.1
CSDE1-213ENST00000530784 RHDQ02161 417 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 CST9Q5W186 159 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 SLC9A4Q6AI14 798 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 SLC29A4Q7RTT9 530 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 SESTD1Q86VW0 696 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 FANCBQ8NB91 859 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 TBC1D5Q92609 795 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 TIFAQ96CG3 184 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 PPP1R9BQ96SB3 815 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 STK31Q9BXU1 1019 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 ZNF287Q9HBT7 754 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 SH3BP4Q9P0V3 963 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-213ENST00000530784 FRMD4BQ9Y2L6 1034 aa8.21□□□□□ -1.1
CSDE1-213ENST00000530784 WIPF3A6NGB9 483 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 MGEA5O60502 916 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 RASSF9O75901 435 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 CELF2O95319 508 aaKnown RBP8.2□□□□□ -1.1
CSDE1-213ENST00000530784 KLRC1P26715 233 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 Q6ZWC4 215 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 KCTD20Q7Z5Y7 419 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 CAND1Q86VP6 1230 aaKnown RBP8.2□□□□□ -1.1
CSDE1-213ENST00000530784 RP9Q8TA86 221 aaKnown RBP8.2□□□□□ -1.1
CSDE1-213ENST00000530784 HASPINQ8TF76 798 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 DPF1Q92782 380 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 REPS1Q96D71 796 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 C17orf80Q9BSJ5 609 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 ISCA1Q9BUE6 129 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 FSD1LQ9BXM9 530 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 GLIS2Q9BZE0 524 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-213ENST00000530784 ADAMTS5Q9UNA0 930 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 PCDHGB6Q9Y5F9 930 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 CDY1Q9Y6F8 540 aa8.2□□□□□ -1.1
CSDE1-213ENST00000530784 YDJCA8MPS7 323 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 JTBO76095 146 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 MAP2K2P36507 400 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms