RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
VPS11-203ENST00000529545 CYP26A1O43174 497 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 TGFB1I1O43294 461 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 STX6O43752 255 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 EXOC3O60645 756 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 STC2O76061 302 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 BEST1O76090 585 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 PENKP01210 267 aaPredicted RBP9.44□□□□□ -0.9
VPS11-203ENST00000529545 PRB1P04280 392 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 PDCP20941 246 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 ADORA2BP29275 332 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 HOXD13P35453 343 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 COPAP53621 1224 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 C21orf59P57076 290 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 NCOA4Q13772 614 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 PTPRNQ16849 979 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 BMT2Q1RMZ1 405 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 SGSM1Q2NKQ1 1148 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 FAM26FQ5R3K3 315 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 UNC93AQ86WB7 457 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 LSM14AQ8ND56 463 aaKnown RBP9.44□□□□□ -0.9
VPS11-203ENST00000529545 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 OR2T3Q8NH03 318 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 DDI1Q8WTU0 396 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 BAP1Q92560 729 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 SLC2A11Q9BYW1 496 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 BTBD1Q9H0C5 482 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 C6orf106Q9H6K1 298 aaPredicted RBP9.44□□□□□ -0.9
VPS11-203ENST00000529545 TM9SF3Q9HD45 589 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 FAM49BQ9NUQ9 324 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS11-203ENST00000529545 RASAL2Q9UJF2 1139 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 NUDT5Q9UKK9 219 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 PLA2G4CQ9UP65 541 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.44□□□□□ -0.9
VPS11-203ENST00000529545 AK5Q9Y6K8 562 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 UBE4BO95155 1302 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 TMEM131Q92545 1883 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 ASXL3Q9C0F0 2248 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 CAPN8A6NHC0 703 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 PLK4O00444 970 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 FSBPO95073 299 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 KIF20AO95235 890 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 SEMA4FO95754 770 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 RPN1P04843 607 aaKnown RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 C1SP09871 688 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 PRKCHP24723 683 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 CD27P26842 260 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 NDST1P52848 882 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 BCAT1P54687 386 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 SEMG2Q02383 582 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 EPM2AIP1Q7L775 607 aaPredicted RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 ZNF276Q8N554 614 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 GOLGA5Q8TBA6 731 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 HNRNPABQ99729 332 aaKnown RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 SDCBP2Q9H190 292 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 CUEDC2Q9H467 287 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 FBRSQ9HAH7 460 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 PNPLA8Q9NP80 782 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 OSER1Q9NX31 292 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
VPS11-203ENST00000529545 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 PCDHGA1Q9Y5H4 931 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 CKAP5Q14008 2032 aa9.43□□□□□ -0.9
VPS11-203ENST00000529545 A0A087X0B3 334 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 H0Y8X5 98 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 KCNK3O14649 394 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 LDOC1O95751 146 aaPredicted RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 KLKB1P03952 638 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 DNTTP04053 509 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 HMBSP08397 361 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 ABCB4P21439 1286 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 ITPKBP27987 946 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 CORO1AP31146 461 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 ACSL1P33121 698 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 EIF2S3P41091 472 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 CASP4P49662 377 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 IL9RQ01113 521 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 SFSWAPQ12872 951 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 FNDC3BQ53EP0 1204 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 CLEC20AQ6ZU45 233 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 RSRC2Q7L4I2 434 aaKnown RBP9.42□□□□□ -0.9
VPS11-203ENST00000529545 GPRIN1Q7Z2K8 1008 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 DENND1CQ8IV53 801 aa9.42□□□□□ -0.9
VPS11-203ENST00000529545 C12orf56Q8IXR9 622 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms